Gene Dbac_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1155 
Symbol 
ID8376819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1268635 
End bp1269489 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID645000388 
ProductIntegrase catalytic region 
Protein accessionYP_003157675 
Protein GI256828947 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.667808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGGCG CACCCGCCCG ACGCCTCCAG GTGGCATACG CCAGGAGTCG CGGACTTTCA 
CAACGCAGGG CGTGTGCGCT GTTATCCACT TCCCGGTCGT CGCTCCACTA CGAGTCACGG
CTGGAGGCCC GGGACAAGCC ACTGATGGCG GCTATGACAG ATCTGGCTGC GACGTATCCG
CGCTTTGGAT ATCGCCGGAT CAACGTGTTC ATGGAGCGTC TGGGGCATGT CATGGGCGCC
GACAAGGCGT TCCGCCTGTG GTCCAAGGCC GGGTTGCAGG TGCCCAGGAA GCGGCCTCGG
AAACGAGTGG CGGCGTCCCG CCCGAGACCG CAACTGCCGA TGGGAGCAAA CGAACTGTGG
GCGTACGACT TTGTCTATGA CGCCTGCGCC AATGGTCAGC AGATCAAATG CCTGACTGTG
GTAGACGAAT ACACGCGGGA ATGCCTGGCT ATAGACGTTG CCGGCAGCAT CAGATCGGGC
CGGGTGATCG AGGTGCTGTC CCGCCTGATC AGCGAACGTG GAGCCCCTCT GAGCCTGCGT
TCTGACAACG GACCGGAGTT CGTGTCGAAG GCGCTGCTCA GATGGGCGGC TCAGGAGTCT
CTGGATCTGG CGCTGATTGA GCCTGGGAAG CCATGGCAGA ACGGTTTGAA CGAGAGTTTT
AACGGCAAAT TTCGCGATGA GTGTCTGTCG ATGGAATGGT TCCGGTGTCG GTCCGAGGCG
CGGGTTGTGA TCGAGGAATG GAGGCGGCAC TACAACTCCA TTCGTCCGCA TTCAAGCCTG
AACAACATGA CGCCAGAACA TTTCTGTCGG CAGTATGGGA AAAACCTGAA CCGTGGGGAA
ACTCTCAAGA ATTGA
 
Protein sequence
MVGAPARRLQ VAYARSRGLS QRRACALLST SRSSLHYESR LEARDKPLMA AMTDLAATYP 
RFGYRRINVF MERLGHVMGA DKAFRLWSKA GLQVPRKRPR KRVAASRPRP QLPMGANELW
AYDFVYDACA NGQQIKCLTV VDEYTRECLA IDVAGSIRSG RVIEVLSRLI SERGAPLSLR
SDNGPEFVSK ALLRWAAQES LDLALIEPGK PWQNGLNESF NGKFRDECLS MEWFRCRSEA
RVVIEEWRRH YNSIRPHSSL NNMTPEHFCR QYGKNLNRGE TLKN