Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1129 |
Symbol | |
ID | 8376793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1236252 |
End bp | 1236854 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645000362 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_003157649 |
Protein GI | 256828921 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACGTG TTTTTGTACT TTCTTTTCTT CTTGCCTTTC AGTTTTTGCT TTTGGCCGGG CAAAACGTTC AGGCTAAAGG CATTTACTAT ATGGTCAAGG AAGATGGAAC TCTTTGCATA ACGGACATTC CTAATTCAAG AAAGTACAAG CCATACAAGT TTGAAAAGAC TATCAATTAT ATTCGGAATG CAATAGTCGC ATTTAAGCGT GATCACAGAA GTGTAGAAGA AGTAAATGCC ATAGTCTCTG GTTTGTGCTC TAAATATGCG GTTGATAAAA AACTTGTTAT GGCGGTGATT GATGTTGAAT CCGGATTCAA TGCAGCCGCT GTTTCCACTG CAGGGGCTCA AGGCTTGATG CAGATCATGC CTGAAACCGG AAGAGACCTT GATTTAGAGG ATCCTTTTGA TCCGTCGGAA AATATCGATG CAGGAATCCG TTATTTGCGG TACCTGCTTG ATACATTTCC AGATAGGCGT CTTGCTGTCG CGGCATATAA CGCAGGGCCA AATGCCGTAA AGAAATATGG GGGGATTCCC CCCTACGCCG AAACTCAAAA TTATGTCGAA AAAGTTTGGG CTCGACTTCA ATATTATGAA TAA
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Protein sequence | MIRVFVLSFL LAFQFLLLAG QNVQAKGIYY MVKEDGTLCI TDIPNSRKYK PYKFEKTINY IRNAIVAFKR DHRSVEEVNA IVSGLCSKYA VDKKLVMAVI DVESGFNAAA VSTAGAQGLM QIMPETGRDL DLEDPFDPSE NIDAGIRYLR YLLDTFPDRR LAVAAYNAGP NAVKKYGGIP PYAETQNYVE KVWARLQYYE
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