| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1095 |
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| Symbol | |
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| ID | 8376757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1203272 |
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| End bp | 1204666 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645000330 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_003157618 |
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| Protein GI | 256828890 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0806614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA CAAAAACTAT TGCCAGGTTG GCGACCCTGA TCCTCGCGTT GATCGTGCCG
CTCCAGGTGC AGGCAATGCC CTATGCCACC CCCGAGACCT GGGGGGGAGA CCTTATGTCG
CGTCCCCGCC TCACCGGAGA CTGGGGGGGA CTTAGGGACG CCATGGCCAA AAATGGAGTG
GTGCTCGACC TGGACACCTA TTGGGTGCCG CAGACCATCA CCAGCGGAGG GAAAGACCAG
GAGAGCGGGT CCTGGGGCAA CGGGATAGCC ACCCTCAACG TGGATACGCA AAAAGCGGGG
CTTTGGCCGG GTGGATTCCT GAAAGTCCAG ACCGTCAGCA GCTTCGGCGA CAGCATCGCA
ACCGATACGG GTGCCATGGT CCCGGCCAAT ATATCCTGGA TGCTGCCCAC CCTTGATGAG
GAGACCGGCC TGCAGGAATT CACTTACACG CAGTTCCTCA GCCAGCATTT AGGGGTGTCA
CTGGGTAAGA TCAACTCCAT CGCGCCGACC AATGTGCTCC ACGGCGACTA CACCAAAGGA
TTCCTGAACG CGGGGCTGAA CCTGCCGCTG GCCTTGGCCA TGGTGCCGCT TTCGGCCTAT
GGCGGAACCG TCCTCTTTCT GCCCAACCAC GATGTCACTC TGGCAGGCAT GGTCCTGGAC
GCGAGCGGCA CCATCGATAA CGACAAGCTG GGCGATGCCT TCAAGGACGG CGTGATGGCC
CTGGGCAGTG CGGATCTGAA GGTCAGGCCG TTCGAACTCC CCGGTCATCA GAATCTGACG
TTCGCCTGGA GCAACAAGAC CCGCATTTCT CTTGTCCAGG ACCCGTCCAA CATTGGGCGT
CTGCTCCTGC AGGAACGCTT TCCGCGGCTT GGGAACCCGG GATCGCCCCT CTACCATATC
CTTGAAAGGC GTGCTCCCGA GCTGCTGGTT CCGGCCGAGC CTCTGAACAC GGAGAAGGAA
ACCTGGGCGG GCGTCTACAG CTTCGAGCAA TTTCTCTGGC AACCCGCGGG CGATCCGCAC
CGCGGCATTG GAGTCTTTTT CAGCGCCGGC GTAAGTGACG GCAAGGCCAA TCCGATCAAA
TACAGCTTTT CCCTGGGATT GGTCGGCAAG GGCGTCGTGC CGGGCCGGCC AATGGACGAT
TTCGGGATCG GGTGGGCGCG CACGGAGTTC AGCGACGACT TTGTGCCCTT CCTGCGTGAC
AGGTTTAACC TCGGTCTTGA TCACGAAGAT GCGATCGAGG TCTACTACAA TGTTTCGGTA
ACGCCCTGGC TCAACGTCAG TCCGAACTTC CAGTTCATTT CTCCGGCCCT GGACAAGACG
TTGGATTCGA GCGGAAATTT CAAAAATCTG GATGATATCT ACATGGCTGG CGTGCGTATC
GGGGTACGGT TTTGA
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| Protein sequence | MMKTKTIARL ATLILALIVP LQVQAMPYAT PETWGGDLMS RPRLTGDWGG LRDAMAKNGV
VLDLDTYWVP QTITSGGKDQ ESGSWGNGIA TLNVDTQKAG LWPGGFLKVQ TVSSFGDSIA
TDTGAMVPAN ISWMLPTLDE ETGLQEFTYT QFLSQHLGVS LGKINSIAPT NVLHGDYTKG
FLNAGLNLPL ALAMVPLSAY GGTVLFLPNH DVTLAGMVLD ASGTIDNDKL GDAFKDGVMA
LGSADLKVRP FELPGHQNLT FAWSNKTRIS LVQDPSNIGR LLLQERFPRL GNPGSPLYHI
LERRAPELLV PAEPLNTEKE TWAGVYSFEQ FLWQPAGDPH RGIGVFFSAG VSDGKANPIK
YSFSLGLVGK GVVPGRPMDD FGIGWARTEF SDDFVPFLRD RFNLGLDHED AIEVYYNVSV
TPWLNVSPNF QFISPALDKT LDSSGNFKNL DDIYMAGVRI GVRF
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