Gene Dbac_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1021 
Symbol 
ID8376682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1104563 
End bp1106110 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content60% 
IMG OID645000262 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_003157551 
Protein GI256828823 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.359049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGT TTACCTCCTC CATCGGACAA CCCAACGCGG TTTCCATCGG GTTCTTTCTG 
GTCTTCGTGC TGGCCACTCT GGTCATCACC TATTACGCAG CCAAACGCAG CAAAACCGCC
TCACAGTTTT ACGCCGCCGG CCGATCTGTC ACGGGGCTCC AGAACGGCAT CGCCCTGGCC
GGAGACTACA TGAGCGCGGC GTCCTTTCTG GGCATCGCGG GCCTCGTGTC CCTCAAGGGC
TATGACGGCC TCATCTATTC CATCGGATTT CTCGTGGGCT GGCCGATCAT CATGTTCCTG
ATCGCCGAGC CGCTGCGCAA CCTGGGCAAA TACACCTTCG CCGATGTGGT TGCCTATCGC
CTCAAGCAAA AACCCATCCG CATCGCGGCG TCCTGCGGCT CGCTCATGAC CGTGGCCTTT
TATCTCATCG CCCAGATGGT CGGTTCCGGC TCGCTGGTGA AGCTCATGTT CGGGCTGCCC
TATGAAGCGG CTGTCGTCGT CGTGGGCGTG ATCATGATCG CCTACGTGCT TTTCGGCGGC
ATGCTGGCCA CGACCTGGGT GCAGATCATC AAGGCCGTCC TGCTGCTGGG TGGAGCTTCC
ATTGTGGTTT TCATGGTCCT GGCACAATTT GACTACAACC CGGTCAATCT TTTCGATGCC
GCCGTGCTCA AGTATGGCGC CAAAGTTCTG GAACCGGGCG GTCTGGTATC GAACCCTTGG
GACGCCCTTT CGCTTGGCAT TGCGCTCATG TTCGGAACGG CCGGACTGCC GCACATCCTG
ATGCGCTTCT ATACCGTGCC CGATGCCAAG GCCGCACGTA AATCGGTGCT CTATGCCACC
GGCCTCATCT CCTATTTCTA CATTCTGACC TTCATCATCG GCTTCGGCGC CATGGTGCTG
GTGGGACAGG ACGTGATCGC CGGGTTCGAC AAGGGCGGCA ACATGGCGGC TCCGCTGTTG
GCCGAAGTCA CGGGTGGCAT CATGTTTCTG GGATTTATCG CGGCGGTTGC ATTTGCGACG
ATTCTGGCCG TGGTAGCGGG CCTGACCCTG GCCGGGGCCA CGACCTTTTC CCATGATCTG
TACGCCAACG TGTTCCGTAC CGGGCGTTCC ACAGAGGAAA ACGAAGTGAA GATGGCCAAG
CGCGCCACCG TCGCCCTGGG GATTCTGGCC ATCGGGCTTG GTATCGCCTT CAAGGGGCAG
AACGTGGCCT TCATGGTCGG CCTGGCCTTT GCGATCGCGG CCAGCGCCAA TTTCCCGGCC
CTTTTGCTCT CGATCATGTG GAAGCGCTTC AGCACGGTCG GCGCGACGGC GAGTATTGCC
GTGGGAGCGG TTTTGGCGGT AGGGCTCATC ATCATAAGCC CCACGGTGTG GGTCGATGTG
CTCGGCAATG CCCAGGCCAT TTTCCCCTGG AAGAATCCGG CCCTGATCTC GCTGCCTGCC
GCCTTTGCCG CGGGCTGGCT CGGTTCGGTC CTGGTTCCTG ACGAGGGCGC CGAGGCCAGA
TACGAGAACC AGCGCGTGCG CAACTACCTC GGAGTGGGCG CTGAATAA
 
Protein sequence
MNEFTSSIGQ PNAVSIGFFL VFVLATLVIT YYAAKRSKTA SQFYAAGRSV TGLQNGIALA 
GDYMSAASFL GIAGLVSLKG YDGLIYSIGF LVGWPIIMFL IAEPLRNLGK YTFADVVAYR
LKQKPIRIAA SCGSLMTVAF YLIAQMVGSG SLVKLMFGLP YEAAVVVVGV IMIAYVLFGG
MLATTWVQII KAVLLLGGAS IVVFMVLAQF DYNPVNLFDA AVLKYGAKVL EPGGLVSNPW
DALSLGIALM FGTAGLPHIL MRFYTVPDAK AARKSVLYAT GLISYFYILT FIIGFGAMVL
VGQDVIAGFD KGGNMAAPLL AEVTGGIMFL GFIAAVAFAT ILAVVAGLTL AGATTFSHDL
YANVFRTGRS TEENEVKMAK RATVALGILA IGLGIAFKGQ NVAFMVGLAF AIAASANFPA
LLLSIMWKRF STVGATASIA VGAVLAVGLI IISPTVWVDV LGNAQAIFPW KNPALISLPA
AFAAGWLGSV LVPDEGAEAR YENQRVRNYL GVGAE