| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1013 |
|---|
| Symbol | |
|---|
| ID | 8376674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1096825 |
|---|
| End bp | 1098648 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645000254 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003157543 |
|---|
| Protein GI | 256828815 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000409081 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTT TTTCCAGCAA ATCCCTGCCC CAGCCCAAAT TCCTGCCCAT GACCCGCGCC
GAAATGGATG CGCTCGGTTG GGATGAACTC GATGTGCTCC TGGTCAGCGG CGACGCCTAT
GTGGACCACC CATCCTTTGC CATGGCCCTG CTCGGGCGCG CGCTGGTGGC GCACGGACTG
CGCACCGGGA TCATCACCCA GCCGCGCTGG GACGGCCCGG AGGATTTGCT CGCCATGGGC
CGCCCCCGCC TGTTCGCGGG GGTCTCGGCC GGGGCCATCG ACTCCATGCT GGCCCACTAT
ACCGCCTTTC GCAAAAAACG CTCCGAAGAC GCCTACACAC CGGGCGGCAG GGCCGGAGCC
AGGCCCAACC GGGCGTGCAT CGTCTACACC AACCTGCTGC GCCGCGCCTT TCCCGGCCTG
ACCGTGATCC TGGGCGGGAT CGAGGCATCC TTGCGCCGCA TCACGCATTA CGATTTCTGG
ACCGACGCCC TGCGCAAGCC CATCCTCCTC GACGCCAAGG CCGACGCCGT GGTCTACGGC
ATGGGAGAGC GGGCCATCCT GAGCATCGCG GACCGGCTCG CGGCGGGCCG GGACATCCTG
GGCATCCCCG GCACCGTGAC CGTGGGCGAG GATTTTCCAG CTGAAATCGA GCTGCCGAGC
CACGAAGACA TGCTCGCCGA TCCCAAGGAA CTGATGCGGG CCACGCTGCT GCTCGAAAAG
CAGGTCCATG ACGGCACGGA CTGGGCCGTG CAGCGCGTCG CCAACCGCGC CATCCTTGTC
GCGCCACCGG CCACGCCCCT GACCACGACG GAAATGGACA CGATCTACGC CCTGCCCTTC
GCCCGCAAGG CTCATCCCGG CTATCTTCTG CCCATCCCGG CCGAAGAGAT GATCCGCGAC
TCGGTGACCA GCCACAGAGG ATGCGGCGGA GGGTGCTCGT TCTGCACCCT GGCCCTGCAC
CAGGGTCGGC GCATCGCTTC GCGCAGCCGG GCTTCCATCC TCGACGAGGT CCGGCGCATG
GCCGCAAGCC CGGATTTCAA GGGCCATGTT TCCGATGTCG GCGGCCCCAG CGCCAACATG
TGGGGGGCAA GCTGCGCCAA GGAAGGACAG CCCTGCAAGC GCCCCAGTTG CATGACTCCG
ACCGTCTGTC CGCACTTTCG CATGGACCAG AAAGCGCACC TCGATCTGCT GCGCACCCTG
CGCCGCACGC CCGGAGTGCG CGGAGTGCGC GTGGCCAGCG GCGTGCGCTT CGACCTGGCC
TTGAAAGACA TGGACGCCCT TGGGGGCTAT CTGCGCGAAT TCGTGGGCGG GCAGCTGAAA
ATCGCGCCCG AGCATGTTTG CGACCATGTG CTGCGCCTGA TGCGCAAGCC CGGCAACCGC
GTCTTCGAGG AATTTCTGAC GATCTTTGAC CGCGAATCCA AGCGCGCGGG CAAGGAGCAA
TACGTCATCC CCTACCTGAT GAGCGCCTTC CCGGGCACCA CCGACGACGA CATGCACGCC
CTTGCCCGCT GGCTCGGCAG CCGGGGCTGG AAGCCCAAAC AGGTGCAGTG CTTCATCCCC
ATCCCCGGAG CAGTGGCCAC GGCCATGTAC CATGCGGGCA TCACCCCGGA AGGAAAGTCC
GTCCATGTGC CGCGCACCGA CGAAGAGCGG CTGCGCCAAC ATCGCATCCT GCTCCCGCCT
GAGGACAGAG GCGCCAAACG TCCAAAGGAC ACGCAGCGCG AACCTCACCC GAAAAGCTGT
CCCGGCCGAT GCCCTGCTCC TTCGCGCAAT TCCAGGCCCC TTCCCCGTCC CGGCAAGACA
AAGACGGGCC GCAAAAAGAA ATAA
|
|---|
| Protein sequence | MSLFSSKSLP QPKFLPMTRA EMDALGWDEL DVLLVSGDAY VDHPSFAMAL LGRALVAHGL
RTGIITQPRW DGPEDLLAMG RPRLFAGVSA GAIDSMLAHY TAFRKKRSED AYTPGGRAGA
RPNRACIVYT NLLRRAFPGL TVILGGIEAS LRRITHYDFW TDALRKPILL DAKADAVVYG
MGERAILSIA DRLAAGRDIL GIPGTVTVGE DFPAEIELPS HEDMLADPKE LMRATLLLEK
QVHDGTDWAV QRVANRAILV APPATPLTTT EMDTIYALPF ARKAHPGYLL PIPAEEMIRD
SVTSHRGCGG GCSFCTLALH QGRRIASRSR ASILDEVRRM AASPDFKGHV SDVGGPSANM
WGASCAKEGQ PCKRPSCMTP TVCPHFRMDQ KAHLDLLRTL RRTPGVRGVR VASGVRFDLA
LKDMDALGGY LREFVGGQLK IAPEHVCDHV LRLMRKPGNR VFEEFLTIFD RESKRAGKEQ
YVIPYLMSAF PGTTDDDMHA LARWLGSRGW KPKQVQCFIP IPGAVATAMY HAGITPEGKS
VHVPRTDEER LRQHRILLPP EDRGAKRPKD TQREPHPKSC PGRCPAPSRN SRPLPRPGKT
KTGRKKK
|
|---|
| |