Gene Dbac_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0976 
Symbol 
ID8376634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1058942 
End bp1059655 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID645000215 
Productanti-sigma-factor antagonist 
Protein accessionYP_003157507 
Protein GI256828779 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG ACAAAATCCT GGTCATCGAT GATGAGAAGG CAACGCTCAA AATGTTTCGG 
CTTTTTCTGG ATGTGTACGG ATTCGACATC TTTACGGCAG AATCCGGGGA AGAGGGACTG
GACGTTTTTG ACAGGGAAAA ACCCGATATC GTCCTGACCG ACATCAAGAT GCCCGGCATG
GACGGGATCG AGGTCCTGCA ACAGATCAAG AAGCGTTCGC CCGCCACGGA GGTCATCGTC
ATCACCGGGC ATGGCGACAT GGATCTGGCC ATTCAGGCCC TCAATCTGGA CGCGGCCGAT
TTCATCAACA AGCCCATCCA GCGTCAGAGC CTTGAACAGG GTCTGTCCCG GGCCAGGGAA
CGGCTCAAGC TGGCCAAGAG CCGGCAGAAC GAGGTCAGCG TCAGTCGGCA GGGCCGGGCG
CTGGTCATTG AAATCCAGGG CAGCGTCAGT TCCCATAGCG AACCGTATCT GCGCGAAGCC
TACGCCAAGG CCCAGGAGGC CAAGGTGCAG CGCATCGTGC TGCATTTCGA CCCCAACACC
TCCGTAAACG GGGCCGGTAT CGCCATTTTG ACCCAGCTTG TGCTGGAGAG CGAAAAGGAC
GGTATTGAGA TTGTGATGGC CGGACTTTCC GAAAATTTCC GCAAGGTTTT CGGCATAGTG
GGCCTGACCC GCATGATTCA GATTTTCGAC AGCCTGGATC AGGCCTGCGC CTAG
 
Protein sequence
MTQDKILVID DEKATLKMFR LFLDVYGFDI FTAESGEEGL DVFDREKPDI VLTDIKMPGM 
DGIEVLQQIK KRSPATEVIV ITGHGDMDLA IQALNLDAAD FINKPIQRQS LEQGLSRARE
RLKLAKSRQN EVSVSRQGRA LVIEIQGSVS SHSEPYLREA YAKAQEAKVQ RIVLHFDPNT
SVNGAGIAIL TQLVLESEKD GIEIVMAGLS ENFRKVFGIV GLTRMIQIFD SLDQACA