Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0935 |
Symbol | ispG |
ID | 8376593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1018260 |
End bp | 1019363 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645000174 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_003157466 |
Protein GI | 256828738 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.758646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAA ACGATCCATC CGTACTTTTT CCGCGCGTAA GGACCCGCTC CCTCTCTGTG GGCGGGGTGG GCATTGGCGG GGACAACCCT GTGCGCGTGC AGTCCATGAC CAACACGGAT ACTCGTGACG TCGACGCGAC CCTGGCCCAG ATCAAGGCCC TGGCCGGGGC CGGCTGCGAG ATCGTGCGTC TGGCCGTGCT CGATCTGGAA GCGGCCATGG CTCTCAAAAC CATCTGCGCC GCCACGCCCG TGCCGCTCAT CGCGGATATC CACTTCGATT CCCGTCTGGC CGTGCAGGCC GTGGAGGCGG GCGTGAAGGG CCTGCGCATC AATCCCGGCA ACATCGGCGG GCCTGACAAG GTCGATCGGG TGGTCGACGC AGCCCGCGCG GCCGGCGTGC CCATCCGCAT CGGCGTGAAC AGCGGCTCCG TGGACAAGGA ACTGCTCAAA AAACACGGCG GCCCGACCCC TGCGGCCATG GTCGAGAGCG CCTTGGGACA TGTGCGGTTG CTGGAAGAGC GCAAGTTTGG GGACATCAAA ATTTCGCTCA AATCCTCAAG CGTTTTGGGT ACGATCGCGG CCTACCGGCT CATGGCGAAG ACCGTCGATT ATCCGTTGCA CATCGGCGTG ACCGAAGCCG GTACGGCCAT GCGCGGGGCG GTCAAGTCGT CCGTGGGTCT CGGGATTCTG CTGGCCGAGG GCATCGGCGA CACGCTGCGG GTTTCGCTCA CCGCCGATCC CGTGGAGGAA ATGCTCGTGG CCTGGGAGAT CCTGCGCGCT TTGGGCCTGC GCTCCAGAGG CCCGGAGATC GTATCCTGCC CGACCTGCGG CCGTACGGAG ATAGGGCTCA TCGAACTGGC CAGCGCCGTG GAAGACAGGC TGCGCGGGGT GGAGGACGTC TTCACCGTGG CGGTCATGGG CTGCGTGGTC AACGGGCCGG GCGAGGCGCG GGAGGCGGAC ATTGGCGTGG CCGGTGGCCG CGAGTCGGGC CTCATCTTCC GCAAGGGCGA GGTTGTGCGC AAGGTCAAGG GCCGGTCGGA GCTCTTGCCC GCCTTCATGG AAGAGCTGGA AAAATTTCTG GAGGAGCGGC GGGGCGTCGC ATGA
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Protein sequence | MTQNDPSVLF PRVRTRSLSV GGVGIGGDNP VRVQSMTNTD TRDVDATLAQ IKALAGAGCE IVRLAVLDLE AAMALKTICA ATPVPLIADI HFDSRLAVQA VEAGVKGLRI NPGNIGGPDK VDRVVDAARA AGVPIRIGVN SGSVDKELLK KHGGPTPAAM VESALGHVRL LEERKFGDIK ISLKSSSVLG TIAAYRLMAK TVDYPLHIGV TEAGTAMRGA VKSSVGLGIL LAEGIGDTLR VSLTADPVEE MLVAWEILRA LGLRSRGPEI VSCPTCGRTE IGLIELASAV EDRLRGVEDV FTVAVMGCVV NGPGEAREAD IGVAGGRESG LIFRKGEVVR KVKGRSELLP AFMEELEKFL EERRGVA
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