Gene Dbac_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0929 
Symbol 
ID8376587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1012069 
End bp1012704 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID645000168 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_003157460 
Protein GI256828732 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.013677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATT TGTCCCTGTA CCTGGTCACG GACCGGAGAC TGTCCCTGGG CCGCTCCACC 
GTGGACATCG TCCGCGCCGC CGTGGCCGGG GGCGTGACCT GCGTGCAGTT GCGCGAAAAA 
GAGTGCTCGA CGCGGCAGTT CGTGACCGAA GCGCGGGCCG TACGGGAACT GCTGGCCGGG 
ACCGGCATTC CGCTGATCAT CAACGACCGC CTCGACGTGG CCCTGGCCGT GGGCGCAGAC 
GGCGTACACC TGGGCCAGAC CGACATGCTC ATCGCCGACG CCCGCCGACT GGTCGGAACG 
GACATGCTCA TCGGCATCTC GGCCGAATGC GTGGACGACG CCGTGCGCGC GCAGGCCGAA 
GGCGCGGACT ATGTCGGGAT CAGCCCCGTC TTCGCCACCC CGACCAAGAC CGATACTGCC 
CCGGCGCTGG GCCTTGACGG CGTCGCCCTC ATCCGCGCGG CCGTGTCCCT GCCCCTGGTC 
GGCATCGGCG GCATCGGCCC CGGCAACGCG ACCGAGGTCA TCCGCGCCGG ATGCGACGGG 
GTGGCCGTGG TCTCGGCCAT CATCTCGGCC CCGGACCCGA AGCGAGCAGC CGCAGAACTC 
AAAACCATCA TTCGCCGAGC CAAGGAACAC CCATGA
 
Protein sequence
MPDLSLYLVT DRRLSLGRST VDIVRAAVAG GVTCVQLREK ECSTRQFVTE ARAVRELLAG 
TGIPLIINDR LDVALAVGAD GVHLGQTDML IADARRLVGT DMLIGISAEC VDDAVRAQAE 
GADYVGISPV FATPTKTDTA PALGLDGVAL IRAAVSLPLV GIGGIGPGNA TEVIRAGCDG 
VAVVSAIISA PDPKRAAAEL KTIIRRAKEH P