| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0897 |
|---|
| Symbol | |
|---|
| ID | 8376553 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 977811 |
|---|
| End bp | 978314 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645000135 |
|---|
| Product | phage regulatory protein, Rha family |
|---|
| Protein accession | YP_003157429 |
|---|
| Protein GI | 256828701 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3646] Uncharacterized phage-encoded protein |
|---|
| TIGRFAM ID | [TIGR02681] phage regulatory protein, rha family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.194242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT CCCTCAAGGT GGCCGAGGTT TTCGGGAAGA TGCACAAGGA TGTACTCAAG
GCCATTCAAA ACCTTGATTG CTCTGAAGAT TTTCGTGGGC GCAATTTTGC GCTGACGGAA
ATTGAGATTC AGGCTGGTCC CGTCAAGCGC ATGTCCCCCA TGTACCTGAT GACCCGTGAT
GGGTTCACCT TCCTGGCTAT GGGATTCACC GGGGCGAGAG CCGCCGAGTT CAAGGAGCGA
TACATCGCAG AGTTCAACCG GATGGAAGCC AAGACTTTCG TGAAGGAACA CAAGCATGAC
ATGAATGACA TTCGCAAGCT GATCGACAAA GGACTGCCGA ATTTTCGGCA GACCTCCTAC
ACCCATCCAC AGAACGGCCA GCAGTACCGT ATGTACCTCA TTGACCATGA CGGATTCACC
CTGCTGGCTA TGGGCTTCGC CGGGGAGGCC GCCTCGTCGG TAATTATCTG GAATTACACA
AAGGTATCGA CTCGATACTT TTGA
|
|---|
| Protein sequence | MTTSLKVAEV FGKMHKDVLK AIQNLDCSED FRGRNFALTE IEIQAGPVKR MSPMYLMTRD
GFTFLAMGFT GARAAEFKER YIAEFNRMEA KTFVKEHKHD MNDIRKLIDK GLPNFRQTSY
THPQNGQQYR MYLIDHDGFT LLAMGFAGEA ASSVIIWNYT KVSTRYF
|
|---|
| |