| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0756 |
|---|
| Symbol | |
|---|
| ID | 8376411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 834992 |
|---|
| End bp | 835648 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644999996 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_003157291 |
|---|
| Protein GI | 256828563 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.901261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCG ATGTGGTACG AAACATCCTT GAGGCCAACG ACGCCGTCGC GGCCGAACTG
AACGCCCGGC TCAGCGCGCA AGGCATCCTG ACCCTCAATC TGATGAGTTC GCCGGGATCG
GGCAAGACCT CCCTGCTGGA GCGCACGCTG ACCGACCTGA AGGAAGAATT CAACATGGCC
GTCATCGAAG GCGACTGCCA GACCGAGAAC GACGCCCGCC GCGTGGCCGC CACCGGGGCC
CGGGCCGTAC AGATCAACAC CGCGGGCGGC TGCCACCTCG ACAGCACCAT GGTCCGTGAC
GCCACGGAAA AGATGGGCGT GGACGGCATC GACATCCTCG TCGTCGAAAA CGTGGGCAAC
CTGGTCTGTC CGGCGGAATT CAGCGTGGGC GAAGACTACA AGGTCACCAT CCTGAGCGTG
ACCGAGGGCG ACGACAAGCC CGAAAAATAT CCCTTCATCT TTGCCGAATC CAAGGTCATG
ATTTTAAATA AGATCGATCT GCTGCCCTAC GTCAATTTCG ACCTGGACCG CGCCAGCGGA
TTTGCCCGCT CCATCAACAA GGACATCGAG ATATTCGCCC TCTCCGCCAC TACCGGCCAG
GGCATGGATG CCTGGTACGA CTGGCTGCGC CGGGAACGGG CCAAGAAGAA AAAGTAG
|
|---|
| Protein sequence | MKVDVVRNIL EANDAVAAEL NARLSAQGIL TLNLMSSPGS GKTSLLERTL TDLKEEFNMA
VIEGDCQTEN DARRVAATGA RAVQINTAGG CHLDSTMVRD ATEKMGVDGI DILVVENVGN
LVCPAEFSVG EDYKVTILSV TEGDDKPEKY PFIFAESKVM ILNKIDLLPY VNFDLDRASG
FARSINKDIE IFALSATTGQ GMDAWYDWLR RERAKKKK
|
|---|
| |