| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0682 |
|---|
| Symbol | |
|---|
| ID | 8376336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 757060 |
|---|
| End bp | 758133 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644999925 |
|---|
| Product | protein-export membrane protein SecF |
|---|
| Protein accession | YP_003157221 |
|---|
| Protein GI | 256828493 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.435801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTTG AAATTATCAA ACGCGACACA AACATCGACT TTGTCGGGAT GCGTAAGTAC
GCGTATGTCC TTTCCGCCGC GCTGCTTCTG GCCGGGTTTC TGTCCCTTCT CGTCAAGGGC
GGTCCACAAT ACGGCATCGA TTTCGCCGGC GGCTTCAATG TTCAGGTCAA ATTCAGTCAG
TCCGTCGAAC TGGACAAAAT CCGCATGGCT CTCGACAGCC CTGCCCTGAC GGGTCTTGTG
GTCCAGGATT TCGGCGATGT CGGGGACAAT GAGGTCCTGT TGCGCGCGTC CTTTTCCGAG
CAGAGCGCCA ATGAGGTCCG TGAAGCCGTT GAAAGCGGGC TTGAATCCGC CTTTCCCGGG
GTGACCCATG AAATTCAGCG CCTGGAAATG GTCGGCCCCA AGGTGGGCGC AGATCTGCGG
GAGAAAGCCC TGGAGGCTAT CTTCTATGCG GTTCTGCTCA TTGCCACCTA CATATCCGGT
CGTTTCGAGC AGAAGTGGAT GGTCGCAGGC CTCATGGCCG CAGGCCTGGC TTCGGTCGTC
TACGTTCTTG ATCTGCTCAA TGCGCCCACA AGCCTGTCCG TGATCGTGGC GACCATCGCC
GCCCTGGTAT TGTGTGTTGT GTTGCGGCTC AAATATGCTC TTGGGGCCAT CGTAGCCCTC
ATCCATGACG TCATGATCCC GCTGGGGCTT TTCTCCTTGC TCAACAAGGA TGTCGACCTG
ACCATCATCG CGGCACTCTT GACCATTGTC GGCTACTCCC TGAACGACAC CATCATCATC
TACGACCGCA TCCGCGAAAA TATCCGGGCC AAGGTTTCGC CGTCCCTTGA CGTCGTCATC
AACAAGTCGG TCAACCAGAC CATGTCCCGC ACGCTCATCA CTGCCGGCAC GACCTTTGTG
GCGGTGTTTT CCCTGTATAT CTTCGGTGGC GGGGTCATTC ATGATTTTGC CTTGACCATG
CTGGTCGGCG TGGTCGCCGG AACCTATTCG TCCGTTTTCG TGGGCGCTCC GATCCTGGCC
TTCTTCAAGC CCCGCATCGA TCTCGAAGAG CGTGTGGAAC AGGCTGCGGC TTAA
|
|---|
| Protein sequence | MSFEIIKRDT NIDFVGMRKY AYVLSAALLL AGFLSLLVKG GPQYGIDFAG GFNVQVKFSQ
SVELDKIRMA LDSPALTGLV VQDFGDVGDN EVLLRASFSE QSANEVREAV ESGLESAFPG
VTHEIQRLEM VGPKVGADLR EKALEAIFYA VLLIATYISG RFEQKWMVAG LMAAGLASVV
YVLDLLNAPT SLSVIVATIA ALVLCVVLRL KYALGAIVAL IHDVMIPLGL FSLLNKDVDL
TIIAALLTIV GYSLNDTIII YDRIRENIRA KVSPSLDVVI NKSVNQTMSR TLITAGTTFV
AVFSLYIFGG GVIHDFALTM LVGVVAGTYS SVFVGAPILA FFKPRIDLEE RVEQAAA
|
|---|
| |