Gene Dbac_0595 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0595 
Symbol 
ID8376248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp669287 
End bp670669 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content60% 
IMG OID644999838 
Productribonuclease BN 
Protein accessionYP_003157135 
Protein GI256828407 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATT TCAACAACCT TTTGGCCAGG GGCGAGCACT TCGTGACGAG GTCCATCGTG 
CATGCCCGGC GCGAAGACAC GCCTGCTCCG TGGTTCGTGA TCCGCCTGCT GCGGACCCTC
CTCTTCGCGA CCCGGGATTT TCAAAACCGC CAGGGTTCCC TGCAGGCATC CGCCCTGACC
TTCTACACCC TCCTGTCTCT GGTGCCGCTC GCGGCCATGG CTTTTGGCAT CGCCAAAGGC
TTCGGACTTG AACAGCTGCT TGAAAAAGAA CTGCTCCGCA ATTTTGCCGC GCAGCAGGAG
GTGGTCCTGC AGGTCATCGC CTTCGCCCGC AACATGCTCG ACAACACAAA GGGAGGGCTC
ATCGCCGGCA TCGGCGTCAT CATCCTGTTC TGGTCCGTGA TCAAGGTTCT TGGCAGAATC
GAACAAAATT TCAATCGAAT ATGGGCTGTC CCCTCGCGCT CGATGTCGCG CAGGCTGAGC
GACTACCTGG CCATCATGCT CATCGCCCCC CTGCTCCTGA TCTTGTCCGG CAGCGCCACG
GTCTTCATCG CATCCCAGGT GCGGGCCATT TCCAACCAAG TCGGCATGCC CGGCATGCTC
GACCCGGCAG TCTCCCTGGG CCTGGGCTTC GCCCCCTACC TGCTGCTCTG GGCCCTCTTC
ACCCTCCTCT ACCTGATCAT GCCCAATACC CGTGTCCAGT TCGCAGGCGC ACTGCTGGCC
GGCATCCTGG CAGGATCGGC GTACCAGCTC CTGCAAGTCA GCTACATCGC TTTTCAAATC
AACGTGGCCA GCTACAATGC CATTTACGGC AGCTTCGCGG CCCTGCCCCT CTTTTTGATC
TGGCTGCAAC TGAGCTGGCA TATCGTTCTC TTCGGGGCCG AGATCGCCCA CTTCTTTCCC
CATTCAGACA CCGTCGCGGC AGAGCCGAAA TGGCGCGAGC GGAGCATGGC GCAAACCAGG
CTGCTGGCGC TGGCGATCTG CCATGAGATC GTGCAGCGCT TTCACCGCGA TGAACCGAGC
TTAAGCGAAG AAATCATTGC CTCGGAGTTT GACATGTCCC GCAGTGAAAC CTCCGAAATG
ATCAACATGC TGGTTCACAC GCACCTCCTG CACCGTGTTC AGCCCGAAGG GGACGAAACG
CCCCAACTGC AGCCAGCCCG CGACAGCGCC AACATCACCA TCCGCGACGT GCTTGCTGCC
GTCGACAATG CTCATGCGAA CCCGAGCTTT ACCCATGACC AACCCAAGCT TGCGGCCATA
GCCGCTTGCC TGGACACGCT GCGAAACGAC CTCGACCACA CTGCCGCCAC AAAATTGCTG
CGCGATATCG AACCTGCGCA ATGCCAAGGG GCCGGCTCTG CAGATGCCAC GAAGAAAAAT
TAA
 
Protein sequence
MEYFNNLLAR GEHFVTRSIV HARREDTPAP WFVIRLLRTL LFATRDFQNR QGSLQASALT 
FYTLLSLVPL AAMAFGIAKG FGLEQLLEKE LLRNFAAQQE VVLQVIAFAR NMLDNTKGGL
IAGIGVIILF WSVIKVLGRI EQNFNRIWAV PSRSMSRRLS DYLAIMLIAP LLLILSGSAT
VFIASQVRAI SNQVGMPGML DPAVSLGLGF APYLLLWALF TLLYLIMPNT RVQFAGALLA
GILAGSAYQL LQVSYIAFQI NVASYNAIYG SFAALPLFLI WLQLSWHIVL FGAEIAHFFP
HSDTVAAEPK WRERSMAQTR LLALAICHEI VQRFHRDEPS LSEEIIASEF DMSRSETSEM
INMLVHTHLL HRVQPEGDET PQLQPARDSA NITIRDVLAA VDNAHANPSF THDQPKLAAI
AACLDTLRND LDHTAATKLL RDIEPAQCQG AGSADATKKN