| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0559 |
|---|
| Symbol | |
|---|
| ID | 8376212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 632614 |
|---|
| End bp | 635082 |
|---|
| Gene Length | 2469 bp |
|---|
| Protein Length | 822 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644999802 |
|---|
| Product | ATP-dependent helicase HrpB |
|---|
| Protein accession | YP_003157099 |
|---|
| Protein GI | 256828371 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACGA ATTCGCGTGA CTGGGCCGGC ATGCCCCCGC TCCCGATCGA TGCAATTCTA
CCCGAGCTCG CGGACACCCT GACCACGGGG GCCGCGTGTC TGGTCCATGC CCCGCCCGGC
AGCGGCAAGA CCACGCGCAT CCCGCTGGCG CTGCTTGCCT CTGCCTGGCT GGGCAAAAAC
AAGATTCTCA TGCTCGAACC AAGACGCCTG GCCGCGCGAG CCGCTGCCCG CCACATGGCC
GGATTACTGG GAGAAAAAGC CGGAGCGCGC GTGGGCTATC GCACCCGCCT CGATATTCGT
GTTTCAAGCG CAACGCGGAT CGAGGTCGTG ACCGAGGGCA TCCTGACCCG CATGCTGCAG
CACGATCCGG AGCTCTCGGG ATACGCCTGC GTCATTTTCG ACGAATACCA CGAGCGCAGC
CTCCAGGCCG ACCTGGGTCT GGCCCTGTGC CTTGAGGTCC GCGCCGCCCT GCGCCCGGAC
CTGCGCCTCA TCGTCATGTC CGCTACCCTG GACGCCAAGG CCGTGGCCGA CCTGATCGCT
CCGTGCCGAA TCGTTGAATG CCCCGGCCAG CCTCACGCAG TGGAAACCCG CTATCTGCGC
GTGTCCGGAC GCTTCCTGGA AGAGCGCATG GCCTTCGCCA TTCGCCACGC CCTGACCACG
GAGCATGGCA GCATCCTGGC CTTTCTGCCC GGAGCCCGCG AAATCCGGCG CACGGCGGAA
CTGCTCGGCC CCCCCGGAGC CGGAGTCGAA ATCCACCCGC TGCTGGGTGC CCTGACCGCG
ACCGAGCAGG ACAAGGCCAT CGCCCCGCCC GCTCCCGGCA CGCGCAAGAT TGTCCTCACC
ACGGCCATCG CCGAGACATC CCTGACCATC GAAGGCGTGC GCATCGTCAT CGACAGCGGC
CTGTCACGGC TACCGCGCTT CGACCCCAAG AGCTCCATGA CCGTGCTGGT CACGGAACCG
GCCGCCCTGG CCACCGTGAC CCAGCGCCGG GGCCGGGCCG GACGCACGGA ACCCGGCATC
TGTTTTCGGA TCTGGGATCA GACTGACGAG ATCAGCCGCA AACCCTACCC CGCCCCGGAA
ATGCTGGAAG CGGATCTTGC TCCGCTGGTA CTGGACCTTG CCCTGTGGGG CACGACCGAC
CCAGCCACGC TGTCCTGGCT CACGCCGCCC CCGCCAGGCC ATTTCAACAG CGCCCTGCGC
CTGTTGCAAA GTCTGGAAGC CCTGGACGAC CAGGGCCGCA TCACCCCGCA TGGGCGCGAA
ATGGCGCTCC TGCCCCTGCA TCCGCGCCTG GGGCACATGG TGCTGAGCGC CAGAAAACAC
GGGCTCGGCC CCACCGCCGC CGCCCTGGCC GCCATCCTCG GCGAACCGGG ACGGAGCATG
CGCGGCTCCT CGGATCTGCG CGACTCGCTG CGCATTCATC CGAGCACCCT GTCACGTAAA
GACACCCTAC GCGCCAGCAT GGAACAGATT GCGCGGCTCG CCTCGATCAA TCTGGAGCAA
CCCGACCCCG AGGCCGCCGG AATCCTCACC GCCTTGGCCT ACCCCGACCG CATCGCACGC
CGCCAGGAGG ATGGCTCCTA CCGCCTGACC AGCGGACGCA AGGCCGTATG GCCCGGACCG
AGCACCCTGG CCGGGCACGA ATTCCTGGCC ATCGCCGATC TGGACGGAGA CGCGGCCGGA
GCCAAAATCT GGCAGTCGGC ACCGCTTTCG TGGGACGAAC TGCAAACCCA CTTCAGGCAG
CAATTCCGAA AAGAGGACGA AGTGCGCTTC GACCCGCTCA AAGACCGGGT CGTCAGCCTG
CGCAAGATCA TGCTTGATAC GCTCTGTATG CGGGAAGAAA AGCTGGGCAC CGACCCGGAA
ACCGTGACCA GTGCGCTGTT GCGGGGACAA AAAGACCTCG CGCGCCTGAA CTGGAGCGAG
GAATGCAAAA ACCTTCGGGA CCGGATTCGG TTCCTGCGCA GCCTGGATCC AGCCTGGCCC
GACATGTCTG ACCAGGCCTT GCTCGAAAGC ATCAATGAAT GGCTTGCTCC TTTCGCAACC
GGCGCGCGAT CACAAGCAGA CCTGGGCAAA ATCAACCTGC TGCAAGCCCT CAAGGCGCTG
GTTGGATGGG ACAAAATGCG GGAACTGGAC CGCCAAGCCC CGGAATTCAT GACCGTACCG
ACAGGAGCGC ATCGCAGGAT CGACTACAGC CCCGAATCCG GCCCCGCCCT CCCGGTCAAA
CTTCAGGAAA TGTTCGGCTG CGCCACCACG CCAACCTTGG CTGACGGCGG CTACGCCCTT
GTCCTGCACC TGCTCTCCCC GGCCGGACGC CCGCTGCAAG TCACCCGCGA CCTGCCCTCG
TTCTGGAAAA ACGCCTACCC CCTGGTGCGC GCCGAAATGC GCGGCCGCTA CCCCAAACAC
CCCTGGCCCG AAGACCCGGC CACAGCCATG CCCACGGCCA AAACCAAGAA AGCAATGACG
CCAAGATAA
|
|---|
| Protein sequence | MSTNSRDWAG MPPLPIDAIL PELADTLTTG AACLVHAPPG SGKTTRIPLA LLASAWLGKN
KILMLEPRRL AARAAARHMA GLLGEKAGAR VGYRTRLDIR VSSATRIEVV TEGILTRMLQ
HDPELSGYAC VIFDEYHERS LQADLGLALC LEVRAALRPD LRLIVMSATL DAKAVADLIA
PCRIVECPGQ PHAVETRYLR VSGRFLEERM AFAIRHALTT EHGSILAFLP GAREIRRTAE
LLGPPGAGVE IHPLLGALTA TEQDKAIAPP APGTRKIVLT TAIAETSLTI EGVRIVIDSG
LSRLPRFDPK SSMTVLVTEP AALATVTQRR GRAGRTEPGI CFRIWDQTDE ISRKPYPAPE
MLEADLAPLV LDLALWGTTD PATLSWLTPP PPGHFNSALR LLQSLEALDD QGRITPHGRE
MALLPLHPRL GHMVLSARKH GLGPTAAALA AILGEPGRSM RGSSDLRDSL RIHPSTLSRK
DTLRASMEQI ARLASINLEQ PDPEAAGILT ALAYPDRIAR RQEDGSYRLT SGRKAVWPGP
STLAGHEFLA IADLDGDAAG AKIWQSAPLS WDELQTHFRQ QFRKEDEVRF DPLKDRVVSL
RKIMLDTLCM REEKLGTDPE TVTSALLRGQ KDLARLNWSE ECKNLRDRIR FLRSLDPAWP
DMSDQALLES INEWLAPFAT GARSQADLGK INLLQALKAL VGWDKMRELD RQAPEFMTVP
TGAHRRIDYS PESGPALPVK LQEMFGCATT PTLADGGYAL VLHLLSPAGR PLQVTRDLPS
FWKNAYPLVR AEMRGRYPKH PWPEDPATAM PTAKTKKAMT PR
|
|---|
| |