| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0471 |
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| Symbol | |
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| ID | 8376120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 544013 |
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| End bp | 545731 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644999711 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_003157012 |
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| Protein GI | 256828284 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.634401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGG AATTTCTGTC CGATGAGGGT GATGTCTGTT TTGATCAGAC ACGTCGTTTC
GAAATTTTGC GCGAGATTTT CGACAGTCTG AGCGAACACG TGGCGGTAAT TGACCGCGAT
GGCTGCATTG TCGACACAAA CCGCAGCTGG CAACGTTTCG CGGCTGAAAG CGGAACGGCC
GACGAGTGTC GCCTGCAGGG CCAGAATTAC ATAGAGGTCT GTGATTCCGC TCAAGGCTCG
GCCGTGGAGG AAGCAAAGCA GGCCGCAGCC GGAATAAGGG CCGTGCTCTC GGGCGAAATT
CCGGAGTTCA GCCTGGAATA TCCATGTCAT ACGTCTTCGG GAAAACGCTG GTTTCTGATG
ACGGTCTCGC CGCTTGTCAG CCACGGCTCC ATTGACGGTG CCGTGGTTTC CCATATCCAG
ATCACGGCTC GCAAACTGGC CGAGGCAGCG CTGGTCCGTT ACGAACGCGC CATCGCGTCC
TCCTCTTCTC TGGTCAGCAT CATCGACAGT GATTTCGTCT ATCAGCTCGT CAACGACAGT
TATCTCAGGG TGCACAGGAA AGCGCGCGAT GAAATCGAAG GGCGCAAGGT TGCCGAGATA
GTGGGGCAGG ACGTTTTCGA CAAGCATGTC GGTCCGAAGC TCACCCGCTG TTTTGCCGGG
GAGACCGTGG AGTACGAGGC CTGGTTCGAT ACGAAATGGG CGGACAGGCG TTGCTACGCG
GTGACGTATT ATCCCTACCG CGAACGAGAC GACAGCATCT CGGGCGCCGT GGTCACGGCC
ACGGACATCA CCGAGGCCAA GCGGATGCAG GATGAGATTG CAAACAGCGC CCGGCGTCTT
GCCGAGGCCC AGCGGCTGGC GAAGGTCGGC AGCTTTGAAA AGGACTACCT GCACGGAAAG
AAGAGCTGGT CCGACGAATT TTGCCGTATT CTCGGGTATC CTCCGGATGC GGTCGATCCG
GATTTCAATC TGTTCATGCA TCACATCCAT CCCGACGACG AGCCCGCTTT CCGGGAAAAT
TTTGAAGCGG CCCAGGCCAC GGGGCATGAA TTCACGACCG AGCTGCGCAT CCGCACCGTT
CAGGGCGAGG AAAGACACGT CAGCCTGGTT TGCGGTTTTG ACCTGCTGGA GGACGGCAGC
ATGTTCCGCC TGCACGGAGC CATGGCCGAC GTGACCGAGC GCCGGCTGGC GGAGCTGCGC
CTGGAGCGTC TGGCCAACAC CGACGAACTG ACCGGCCTGC CCAACCGCAG GCATTTTCTG
GAGTGCGTGC GTGCGGAGAT GACCCGCTCC AGGCGTTTTG GAAAGAGCCT GTGCGTGGCC
ATGGTCGACA TCGACGATTT CAAAAAGGTT AACGATACCC ATGGCCACGG GGTCGGGGAT
CTGGCCTTGC GGCATGTGGC TCAAACCATC AACGGTTTGC GCAGGGCAGT GGACGTGGTC
GGGCGTCTTG GAGGCGAGGA GTTTTGCGTC CTGTTTCCCG AGGCGGGACT CGCAGCTGGA
ATCACGGCGG CGGAGCGCGT GCGCAAGGCA CTGGCCGAAG CGGTTCTCGA GCATGGGGAC
CTGCGCTTGC GGCTGACGGT CAGCATCGGC CTGGCGGAAT ACTCGGGGGA CGAGAGCCTG
GACGGGCTTT TGAGGCGCAG CGACGAGGCT CTTTACGAAG CCAAGCGCAC CGGCAAGAAC
CGGGTCTGTT CCCGGGGAGT GGATTCCGCT CCGGCATGA
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| Protein sequence | MSTEFLSDEG DVCFDQTRRF EILREIFDSL SEHVAVIDRD GCIVDTNRSW QRFAAESGTA
DECRLQGQNY IEVCDSAQGS AVEEAKQAAA GIRAVLSGEI PEFSLEYPCH TSSGKRWFLM
TVSPLVSHGS IDGAVVSHIQ ITARKLAEAA LVRYERAIAS SSSLVSIIDS DFVYQLVNDS
YLRVHRKARD EIEGRKVAEI VGQDVFDKHV GPKLTRCFAG ETVEYEAWFD TKWADRRCYA
VTYYPYRERD DSISGAVVTA TDITEAKRMQ DEIANSARRL AEAQRLAKVG SFEKDYLHGK
KSWSDEFCRI LGYPPDAVDP DFNLFMHHIH PDDEPAFREN FEAAQATGHE FTTELRIRTV
QGEERHVSLV CGFDLLEDGS MFRLHGAMAD VTERRLAELR LERLANTDEL TGLPNRRHFL
ECVRAEMTRS RRFGKSLCVA MVDIDDFKKV NDTHGHGVGD LALRHVAQTI NGLRRAVDVV
GRLGGEEFCV LFPEAGLAAG ITAAERVRKA LAEAVLEHGD LRLRLTVSIG LAEYSGDESL
DGLLRRSDEA LYEAKRTGKN RVCSRGVDSA PA
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