Gene Dbac_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0439 
Symbol 
ID8376088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp517079 
End bp518632 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content67% 
IMG OID644999680 
Producttranscriptional regulator, GntR family with aminotransferase domain protein 
Protein accessionYP_003156981 
Protein GI256828253 
COG category[K] Transcription
[E] Amino acid transport and metabolism 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGG CACTGGATTC TGATTCCTCC GAGCCCGTTT ACGCCCAGAT CAGTGGCCAT 
TTCCGCCACA GCATCCTGTC CGACAACCTG CGGCCCGGGG TCCGGTTGCC TGCGGTCCGC
GTCCTGGCCG CGAATCTGGG CGTGAGCCGG GGCACGGTGG AGAGCGCCTA CGCCGAACTT
CTGGCCGAGG GGCTGATCAC TTCCCGGCAG GGCAGCGGCT TTTATGTGCT GCCCCATGCA
CCGGGCGAAA CCGGCGGTTT CCCCCGCGCC GGTGGGTGGC CCGCCTGGCA GGACCGTCTG
CGCTATGGCG GCTTCGAGGC CATGAGCGCC TATCTGCCGG AGGTCAGCCG CCAAACGGAC
TGGATCGCCC TGGACGGCGG GGCCTGCGAT CCGCGCCTTT TTCCCATGGA CGAGTTCAGA
AGGCTTCTGG GGCAGGTCAT GCGCCGGGAC GGGGCGGCGG CCGTGGAGTA CGGGGAGATC
GCCGGATTCG GGCCCCTGCG CGCCACCCTG GCCCAGGTTC TGGCCAGCCA GGGCATCCAG
ACCGGGCCCG GCAATATTCT GATCACCGCC GGGTCCCAGC AGGCCCTTTC CCTGGTTGCC
GGACTGATCC TGCCGCCCGG ATCAAGCGTG GTCGTGGAGC GTCCGACCTA TGCCGGGGCC
CTGGACGTGT TCCGCTCCCG GAACCTGCGC ATTCACACCG TGGGCCTGGA CGAGGACGGC
CTGGACGTGG ACGAGCTGGA AGGGATTCTG CGCCGCCATA AGCCCGGGCT CATCTATACC
ATACCCAATT TTCACAACCC CACGGGCGCC TGCCTCAGCG GTCAGCGCCG CAGGCAGCTG
ATCAGTCTGG CCGGACGCTT CGACGTGCCG GTCCTGGAAG ACGATTATGT CGGCGACATC
CGCTACGAGG GACATGTCCA GCCGACGCTC AAGTCTCTCG ATCCGGACGG GCGGGTCATC
TACATGAGCA CCTTTTCCAA GATGCTCATC CCCGGCCTGC GCGTGGGTTT CGTGGTCGCC
GACGGCCCGG TCTACGCCCA TCTGCTGCGT TCCAAACGCT GCCACGATCT GGCCACCTGC
AACCTGATCC AGCGGGCGCT CAAGGATTAC GTGTCCGTGG GTCGCTATGC CGCCCACCTG
CAACGCTCCT GCACCCTCTA CCGCCGTCGT CGGGACGCCA TGCTCGCGGC CCTGGAGCGG
CACATGCCGT CCGGTACACG TTGGACGCGG CCCAAGGGAG GGCTTTTCGT GTGGGTCAAT
CTGCCGGAAG GAACGAAGGC CTCCGACCTG CTGCCCAAGG CCTGCGGGAA AGGCGTGATT
TTCGCGCCGG GGGGAAATTT CCATCTCGAT CCCGCCCAGG GCGAAGGGTT CATGCGGCTC
AATTTCGCCT CCAACAGCGA GGAGATCATC GAAGAGGGGA TCAGGAGGCT GGGGAGGGCG
ATGGGGGGCA GGGCGGACAC GTTGGGCAGG GCGGACACGT TGGGCAGGGC GGACACGTTG
GGCAGGGCGG ACACGTTGGG CAGGGCGGAC ACGTTGGGCA GGGCGGACAC GTAG
 
Protein sequence
MRLALDSDSS EPVYAQISGH FRHSILSDNL RPGVRLPAVR VLAANLGVSR GTVESAYAEL 
LAEGLITSRQ GSGFYVLPHA PGETGGFPRA GGWPAWQDRL RYGGFEAMSA YLPEVSRQTD
WIALDGGACD PRLFPMDEFR RLLGQVMRRD GAAAVEYGEI AGFGPLRATL AQVLASQGIQ
TGPGNILITA GSQQALSLVA GLILPPGSSV VVERPTYAGA LDVFRSRNLR IHTVGLDEDG
LDVDELEGIL RRHKPGLIYT IPNFHNPTGA CLSGQRRRQL ISLAGRFDVP VLEDDYVGDI
RYEGHVQPTL KSLDPDGRVI YMSTFSKMLI PGLRVGFVVA DGPVYAHLLR SKRCHDLATC
NLIQRALKDY VSVGRYAAHL QRSCTLYRRR RDAMLAALER HMPSGTRWTR PKGGLFVWVN
LPEGTKASDL LPKACGKGVI FAPGGNFHLD PAQGEGFMRL NFASNSEEII EEGIRRLGRA
MGGRADTLGR ADTLGRADTL GRADTLGRAD TLGRADT