Gene Dbac_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0428 
Symbol 
ID8376077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp504291 
End bp504812 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID644999669 
ProductNLP/P60 protein 
Protein accessionYP_003156970 
Protein GI256828242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTCC GCAAATTACT TGCATCACGT TGCCCCGTGA CCCGTGATTA TTCCTTCCTG 
GTCTTTGTCT GTCTGCTTTT TCTGGGGGTC GGCTGCGCAC CCAAGACCGT GATTCAACCT
GTCGTGGTTC CGCCTTCTCC GCACACTGTC CGTGACGCGT CGGTTTCTGA AATCCTGTTG
TCCCAGTTTG AGGCATGGAA AGGCGTGCGG CATCGAATCG GCGGTACGGA CCGGCAGGGC
GTGGATTGCT CGGGGCTGGT GCAGGCGATT TTCCGGGAGG CGTTTCAGGT AACGCTGCCC
CGCACATCCC GGGATCAGAG CCGGATGGGC CAACGGGTCG AAGTCAAAGA GATGCGGCCC
GGAGATTTGG TCTATTTTCT GGACAAGGGT GGCGATCACA TCGGCGTGCT TGTGGCGCAA
AGAACATTTC TGCACGCCTC GGCGAGCCGG GGGGTGACCC TCTCAACCCT TGACGCCTAC
TGGTGGCCGA GACTCAAGCG GGTGCAGCGC GTCCTGTCCT GA
 
Protein sequence
MTVRKLLASR CPVTRDYSFL VFVCLLFLGV GCAPKTVIQP VVVPPSPHTV RDASVSEILL 
SQFEAWKGVR HRIGGTDRQG VDCSGLVQAI FREAFQVTLP RTSRDQSRMG QRVEVKEMRP
GDLVYFLDKG GDHIGVLVAQ RTFLHASASR GVTLSTLDAY WWPRLKRVQR VLS