Gene Dbac_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0369 
Symbol 
ID8376017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp436406 
End bp437575 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID644999610 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003156912 
Protein GI256828184 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACA GCCTGGCTTT TCGCGGACTC ATCACATTCA TCCGCGATCA GTATCGATCC 
AAAGACTTCA TCCCCTTGCA CGCGCCCATT TTTCATGGCC GTGAGAAGGA GTACGTCAGC
GAGACCATCG AATCGACCTT TGTCTCCAGT GTCGGCGCTT TTGTGAACCG GTTCGAAGAC
GATATCGCCT CGTACACCGG GAGCCCTAAA GCCGTGGCCA CGGTCAACGG CACGGCGGCC
CTGCACGCCG CCCTGATTCT GGCCGGGGTC CTTGAGGGCG ATCTTGTTGT CACGCAGGCG
CTTACTTTTG TCGCGACCTG CAACGCCATC AGCTACTGCG GAGCTCAGCC GGTCTTTGTG
GACGTGGATC GACATACCTT GGGGCTCTCC CCCAAGGCTT TGGGGAACTG GCTGGATGAA
CACGCCAGAC TCGACAGCGA CGGCGTCTGC AGAACAAAAC ACGGGCAGCG CGTCATCCGG
GCCTGCGTGC CCATGCATAC CTTCGGGCAT CCGTGCGATC TGGACGGATT GAGCTCCATC
TGCGCGCAAT GGGGTCTTGC CCTCGTGGAA GACGCTGCGG AATCGCTGGG CAGCCTTTAC
CATGAGCGTC ATACCGGCAC CTTTGGCCTG CTGGGGACAT TGAGTTTCAA CGGCAACAAA
ATCATCACCA CAGGCGGTGG CGGAATGATT CTGGCCGGAA CGGGGTTGGG TGCCAGAGCC
AAGCATCTGA CCACAACAGC CAAGCTGCCC CACCCCGTTG CGTTCTTCCA CGACGAGGTA
GGGTTCAACT ATCGCCTGCC CAACATCAAT GCCGCCCTTG GCTGCGCCCA ACTTGAACAA
CTGGAACAAT TCGTGGACGC CAAACGGGCA CTGGCTGGTC GGTACGCAGC ATATCTAAGC
AGCAACAGTG GCCTGATCTT TGTCACCGAA CCAGAAGGCT GTAGATCGAA TTACTGGCTC
AATGCTGTTG TCTGCGAGGA TGAGAAAGAG CGGAACTCAC TGCTTGACGC CACTGCCGCA
GCCGGGGTCA TGACGCGGCC CGTCTGGCAA CCGATGCACC TGCTACCCAT GTTCAAGGAA
TGTCCCCGTG ACGACCTGAC TATGACGCAA TGGCTCTCGG CCAGAATCGT CAACCTGCCG
AGCAGCGCGC CACTGGATAG AATACCATGA
 
Protein sequence
MSDSLAFRGL ITFIRDQYRS KDFIPLHAPI FHGREKEYVS ETIESTFVSS VGAFVNRFED 
DIASYTGSPK AVATVNGTAA LHAALILAGV LEGDLVVTQA LTFVATCNAI SYCGAQPVFV
DVDRHTLGLS PKALGNWLDE HARLDSDGVC RTKHGQRVIR ACVPMHTFGH PCDLDGLSSI
CAQWGLALVE DAAESLGSLY HERHTGTFGL LGTLSFNGNK IITTGGGGMI LAGTGLGARA
KHLTTTAKLP HPVAFFHDEV GFNYRLPNIN AALGCAQLEQ LEQFVDAKRA LAGRYAAYLS
SNSGLIFVTE PEGCRSNYWL NAVVCEDEKE RNSLLDATAA AGVMTRPVWQ PMHLLPMFKE
CPRDDLTMTQ WLSARIVNLP SSAPLDRIP