Gene Dbac_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0338 
Symbol 
ID8375986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp396425 
End bp397795 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content45% 
IMG OID644999579 
ProductH(+)-transporting two-sector ATPase 
Protein accessionYP_003156881 
Protein GI256828153 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.029372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTTC AGTCCAAGGT TCTAAAAATG CACCCTGCAA CCCTCGTGCT TGCCAGTTTT 
CTATTGGTCA TTTCTGCCGG GACAATACTG CTCATGCTTC CTGTGTCCAC GCATGACGGG
CACATACCCT TCATCGATGC ACTCTTTACC GCTACATCCG CAGTTTGCGT GACAGGACTT
GTTGTTGTGG ACACGGGAAG TTATTACACA TTGTTCGGGC AGTGTGTGAT TCTTGCTCTC
ATTCAGATAG GCGGACTTGG TTTAATGACA ATCTCTGTTG CCCTTTTTCA ATGGCTTGGG
CGCAGTGTTT CTTTTCGGCA TCGAATGGCC ATGCAAGATC TCTTTGCGCA TACTCCGCGC
GAAGACATTT TTGTTCTCGT CAAGAGTATA ATTTTGTTTA CACTTGCAGC TGAATCAGTA
GGCGCGATTT TTTTAACTTT GCATTGGATG AATGAATATT CAATAAAAGA AGCATTATAT
ATGGGGTTAT TTCATTCTGT TTCAGCATTT TGCAATGCTG GTTTCGCATT GTTTTCTGAC
AGCATGGTTC GGTACAGTGA TAGTATAATT TTGAATTCCA CGATATGTTT CCTCATTGTG
TTGGGAGGGA TCGGATTTCC AGTGCTTTAT GATATTCAAA TTTGGAGTGC CGGACGCAAG
GGAGCCAGAG GCCGCTTGTC GATACAGAGC AAAACAGTGC TGCTGACCAC GGTAGTGCTG
ATATTGTTTG GTGCAATCAT GTTCGCATTT CTCGAACAGA GTGGTGAAAA TTTGCAAACC
TCGCTTGTAC ACAGAATTCT ATCTCCGTTA TTTCAGTCGA TCACGTGCAG GACGGCGGGG
TTTAACACTG TGGATATAGG ATCTCTCAAG GATGCCACGT TGACCATGAT GATTTTTTTG
ATGTTCTTTG GTGCATCCCC TGGGTCGTGT GGAGGAGGAG TCAAAACCAC GACTCTTGCA
CTATTGCTCG CTTTCACCAT TGGTCGGATT AAAAAAAGAC GGCGAGTGAA CATGTTCAAA
AAAAGTATCC CCAATGAAAC TGTTACTCGC AGTGTCTCGC TTGTGCTTGT TTCTCTCGTA
GTGATTGGCG TCGCGCTTTT TTTGCTCCTC ATTGGTGATG CAGTGGGCGG GCATGAAACA
GGTGGGTCGA ATGGAGCGTT TTTGTCCTAT TTGTTCGAAA CTGTTTCCGC TTTCGGCACG
GTGGGGCTAT CCATGGGTAT CACTGCGGAC CTTACCACTT GGGGAAAAAT TATCATTATA
CTCATGATGG TGGTTGGCCG CGTTGGAGTT CTGACGTTTT CGTACATAAT TGTAGGGTCC
GTGGCGACGA AAGGTTTTGA ATATTCTGAA GAAAATCTCA TGATCGGATA G
 
Protein sequence
MTFQSKVLKM HPATLVLASF LLVISAGTIL LMLPVSTHDG HIPFIDALFT ATSAVCVTGL 
VVVDTGSYYT LFGQCVILAL IQIGGLGLMT ISVALFQWLG RSVSFRHRMA MQDLFAHTPR
EDIFVLVKSI ILFTLAAESV GAIFLTLHWM NEYSIKEALY MGLFHSVSAF CNAGFALFSD
SMVRYSDSII LNSTICFLIV LGGIGFPVLY DIQIWSAGRK GARGRLSIQS KTVLLTTVVL
ILFGAIMFAF LEQSGENLQT SLVHRILSPL FQSITCRTAG FNTVDIGSLK DATLTMMIFL
MFFGASPGSC GGGVKTTTLA LLLAFTIGRI KKRRRVNMFK KSIPNETVTR SVSLVLVSLV
VIGVALFLLL IGDAVGGHET GGSNGAFLSY LFETVSAFGT VGLSMGITAD LTTWGKIIII
LMMVVGRVGV LTFSYIIVGS VATKGFEYSE ENLMIG