Gene Dbac_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0318 
Symbol 
ID8375966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp371980 
End bp373314 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content62% 
IMG OID644999559 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003156861 
Protein GI256828133 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.623728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGACA AGGCTACGAC AATTTTGGCC GTGGACGACA GCCCCGCCAC CCTTGAAGTC 
ATCTCGCGCA ACCTGACCGG GGCGGGATAT GTGGTCCATA CCTGCGGCAG CGTCGAGGAG
GCCGGAGCCT TTCTGGACGA GACGCCCGTG GACCTGATCA TCACCGATTA CAAGATGCCT
CGGGCAAACG GTCTGGAGCT CATCAAATAT GTGCGGGACA ATTTCAAGGA TACCGAGATC
ATGATGATCA CGGGCTATCC GACGATCAGC GGGGCCGTGG AGGCCATGCG CGACGGAGCC
GGAGAGTACC TGGCCAAGCC TTTCACCGGC GAGGAGCTCT TGGCCGTGGT CCGGCGGATT
CTTGAAAAAC AGGTCAGGAG GCGCGCCGCC CATGCAGGCG GCCAGGAACT CAGCGCTTTC
GGGATCATCG GCAACTGTCC GGAGATGCAG GCCGTTTACG GGCTTATCCG CAAGGCCGCG
CAGACCAGCG CCAATGTATT CATTTCCGGG GAATCGGGCA CCGGCAAGGA AGTGGTGGCC
CGCGCCGTGC ACTATAACAG CGACCGCAGG GCTTCGGCCT TTGTGCCGGT CAATTGCTCG
GCCATTCCCG ACACCCTGCT TGAGAGCGAA CTCTTCGGCC ATGTCAAGGG CGCCTTCACC
GGCGCCAAGG ACAGCCGGGC CGGTTTTTTC GAGATCGCCA ACGGCGGGAC CATCTTTCTG
GACGAAATCG GAGACGCCAG CCCGAGCTTG CAGGCCAAGC TGCTCCGGGT CATGCAGAGC
AAGGAATTTT GCATGGTCGG GTCGTCACGC ACCCGCACCG TAGACACCCG CATCATCGCA
GCCACGCACA AGGATTTGAA ACGGCTGGTG GCGCAGGGCC TTTTTCGGGA GGACCTCTTT
TACCGCATTC ACGTCGTGGA GATCCGCCTG CCGTCCCTGG CCGAACGCGG GGACGACATC
CTCATGCTGG CCAATCATTT CCTGCGCAAA TTCTCCGCGG ACATGAATCG CGAGACCCCG
CGCATGACCG ACGAGGCTCT GGACGCCATG GCCCAGTACG CCTGGCCCGG CAATGTCCGG
GAATTGGAGA ACCTGTTGCA GCGTCTGGTC ATCGTCGGTG ACGGGCCGGT CATCGACATC
ACCGACCTGC CCGAGTCCAT GCGCTTTTCC ATCACCCGTG GCCGGCACGG AGACAAGACC
CTGGCCGAGG TGGAAGCGGA CCACATCCGC GCGGTCCTGG CCCGCACCGG CGACAACAAA
ACCCGCGCCG CCGAGATCCT GGGCATCGAC CGCAAGACAT TGCGGGAGAA GTTGAAGCGT
CTGGGGTTGG GGTGA
 
Protein sequence
MQDKATTILA VDDSPATLEV ISRNLTGAGY VVHTCGSVEE AGAFLDETPV DLIITDYKMP 
RANGLELIKY VRDNFKDTEI MMITGYPTIS GAVEAMRDGA GEYLAKPFTG EELLAVVRRI
LEKQVRRRAA HAGGQELSAF GIIGNCPEMQ AVYGLIRKAA QTSANVFISG ESGTGKEVVA
RAVHYNSDRR ASAFVPVNCS AIPDTLLESE LFGHVKGAFT GAKDSRAGFF EIANGGTIFL
DEIGDASPSL QAKLLRVMQS KEFCMVGSSR TRTVDTRIIA ATHKDLKRLV AQGLFREDLF
YRIHVVEIRL PSLAERGDDI LMLANHFLRK FSADMNRETP RMTDEALDAM AQYAWPGNVR
ELENLLQRLV IVGDGPVIDI TDLPESMRFS ITRGRHGDKT LAEVEADHIR AVLARTGDNK
TRAAEILGID RKTLREKLKR LGLG