Gene Dbac_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0118 
Symbol 
ID8375751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp143766 
End bp147236 
Gene Length3471 bp 
Protein Length1156 aa 
Translation table11 
GC content35% 
IMG OID644999347 
Productglycosyl transferase family 2 
Protein accessionYP_003156663 
Protein GI256827935 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG ATTATTTAAA AAATATCAAT CTGACCATCG TTAGCAATTA CTTACCACGA 
TTTGACGTTG GATCATCGAA TACTCGTATT TATCATATAG TAAAATTACT TTCAAATATG
GGAATATATA TTACTTACAT TTATTTTTAT ACGTCTCTCG ATGATACACG ATACATTAAA
TCGATACCAG AAGTAAACAC TATACGACTA AACGGCAGTC CCCATGAACA CGTTCAAAAT
ATTCTCGCCT CGAAACCGGA CATCCTTTGG TTAACGAACC TTTGGACTCC TATTTTTTTC
GAATCCATGT CGCAGTTGAT GAACAACGTG CGCAATCGAC GACCTGAAGT TAAAATCATT
CTTGATACTA TGGATTTGCA TGCAAAAAAA TATCACCGCC GATACGCAAT CACCCGATCA
CCTGACGATT TATTTACAGC AAAAAAATTT CTTGATTTAG AAAAAACAAA TTATCCGAAT
GCTGATGCGG TAGTTGTAGT GACCGAAGAT GAAAAAAATG ACATTTTGGG GTTAAAATTG
GACTCCCCTT CTATTTATGT AATTCCGAAT ATTCACCAAA TATCAACTGT GAATACTTCT
TATGATCAAC GCGGCGATCT AGTATATCTC GGCAATTTTA ACATCAACCA TAACATTGAT
GCTGTTTTAC ACTTCGTGAA AGTAATCTTT CCATACGTCT CCAAAAAGTA TCCTAAACTT
CGGTTACATA TTCTAGGCCG AGAGGCTGAC ACTAAACTTA GTCAATTAGC TGGCCCAACT
ATATGCGTTC ATGGGTTTGT CCATGACTTA GAAAAGGCTC TGGCGCAATT TCGTGTTTTC
ATCTGCCCCA TGACCTACGG AGCCGGAATG AAGGGCAAAC TCGGGGAGGC TATGGCTAAC
GGCCTCCCTA TTGTGGCAAC AACCATTGGG GCAGAGGGAT TTGATCTAAT TGATGGAGAA
AATTGCTTTA TCGCGGATTT TCCAGAAGAG TTTGCACAAA AAACAATCCA ACTTTATGAA
AATGAAATCC TATGGAATAA TTTCAGCACT AACTGCAGAA ATTTAATTCA ACAAAATTTC
TCCTATGAAC CGGTTGCAAA ACTACTCCGA GAATTAATAT TTTCATTTAA GCCAGCAAGC
ATCTTATTGA CCCACGAACA GGCGGGGAAA GATTTTGAAA ACAAACCTCC CAATAAGAAC
ATTTTAACAA GCAATAGCTT CACAACTGTC CATAAAATTG AAAGCTATCT TTCAAGCATT
AACTGGCTAC ATAAGCTTTT CGACTACTCT TCACATTTTG ACTACGCAGA AATTATTAAT
GATAATAAAA TACCAGCAGT TTCTGTTATC ATCATCTCAT GGCGCCTTCA TCCTGATACC
ACAAACTGCC TACAAATCCT GAAAAAACAA CGTACCCAAC CCTTTGAGAT TATTTTTGTC
GATAACGGCT CCGATCTTGG GATATTTGAT GCTTTGAAAC CCAATATCGA TACTTACGTA
CGTCTTAACA GCAATTCTGG AGCCTATTTA GCACGTAATA TAGGAAGCAT TTTCGCTAAA
TCTCCAATAC TTTTTTTTCT AGACGATGAT GCAATTCCTG CAGACAATAT TATCGATAGC
CATTTAAGCT GCTATACAAA GTTCGATGTT ATCGCTGTAC GCGGAGTTTG CAAGCCAAAA
ACAAACAACC CCCTTAACCA ACAAGCGAAA CATTACTACC TAGGACCAAA GCCCTTCCCA
ATTTATGCTG ATATTGAAGG AAACACATCG TATCTTGCCT CAGCATTTTT CAAGGCTGAC
GGCTGGGATG ATGCAATCAG ATTTGGAGGA GGAGGAGTCG ATTTATCACG ACGCCTTCTC
GAAATTGAGC CTGATATGCG AAAGCAGATT TACAGCCCTG ATCCGATTAT ATTCCATGAC
TTTGCATCGG ATCAAAGCCA TCTTGAAATG AAGCGAGAAA AGCAACGGCA ATCAAGAGCA
CGTCTTAAAA AGAAACATCC TGATTATAAC GAATTCATTG AAAGCTGGAA ACATTTTCGC
AACAATGAAG AAGTCCTCCT CCTAAAATCT GGGGCAAGTT TCGTTAGAAC TCCAAACGCA
AACTATCGCA AAATAAAATC TAGCAAAGTA ATTGAAAATC CATTAATTTC TATTTGTATA
CCAACCTATA ATAGAGAAAA TTTTATTTCA TCAGCTATAA AATCAGCTGC AAATCAGTCA
TATAAAAATT GTGAAATTAT TGTTGTAGAT GATGGATCTA CAGACAACAC AAGAGATATC
GTTCTTAGTT ATGGAATAAA AAACTTAAAG TACATTCAAA AAGAACATAC AAGCGCACCG
GACACTCGTA ACAGATGCAT TTTCGAATCA AGTGGTGATT TTATTTTATG GCTTGATAGC
GACGATTTTA TATCTTCCAA AATTATCGAA GAGTATGTCA ATTTAATGGA TTCATTTAGT
GATGTAGATA TATTTTATTC AAATCATTTT TGTATCGATG AAAAAGGTTA TGTCTTAAAG
CAATACTCAC ATATAGATTG GCATAATAAA AATGATGAAA TGCTTCGAAG ATTTATGACC
AAAAATCCAC TCCCTAACCT TGGAACACTC GTACGTAAAA GTATATATTC AGAAATAGGC
GAATACGACA TCAATTTTCT TCGAGCACAC GATATGGAAT TTTGGAGTAG AGTTGCTCTT
GCAGGAAAAT TTACTTGCAA ACATGTTGAT AAATACCTTA ATTATATTAG ATTTCACAAT
AACAACATTA CAGGGATTAA AAATCCAATC AAAACTGATT TTAGTTATGA AGCTAAAATT
ACAAATAATA TTTTAGAAAA AACAAAAATA GAAAATTTAT TTAACAATTT AAATTGGAAA
AACGAAAAAC TCATCGCTTT TCAAACTGCT TATTTAAAAA TTATTGATCG ATTTATTGAA
ATTTACGCAC TCAATGATGC CTTATTAACA TGTGAGAAAT ACTTAATAAA CGATCATAGC
AACAGCTCTC TATTAAAAAA GAAAAAATAT ATTCTCGAAC TAATGAATGA CTTTCAAAGT
CATCACGCTA TATTTTCGCA AATCATGAAA AAAACCCAAA CCCGGTACAT AGACGAATAT
TTTAATTTTG TTAAATCAAT GAATATTCAA GGTACAGAAA AAAATCATAA TTTTGAATTG
AATGACTCTG ACATAATTAC CTTATTAACA AAACATGCCA AAAAATATTT TGCCCTTAAA
AATTATAACA TATCTTTATA TCTATATTTA GCTTTATCAC ATTTTGACCC AGTAAATTCA
AACCTGCTCA AAATTATTTC AATGCACTAC TTGATGCTTG GTGATCCTAT AAATGCAATG
CATTATATCT CTCAAGCCAG CACTCTTTCC CCTTCAGATA AAGAGATTGC AGACCTGCTT
TTTCAGACAA AAAAATGCAT TACTTTAAGA AGCAAAGTAG CCATACCATA A
 
Protein sequence
MQKDYLKNIN LTIVSNYLPR FDVGSSNTRI YHIVKLLSNM GIYITYIYFY TSLDDTRYIK 
SIPEVNTIRL NGSPHEHVQN ILASKPDILW LTNLWTPIFF ESMSQLMNNV RNRRPEVKII
LDTMDLHAKK YHRRYAITRS PDDLFTAKKF LDLEKTNYPN ADAVVVVTED EKNDILGLKL
DSPSIYVIPN IHQISTVNTS YDQRGDLVYL GNFNINHNID AVLHFVKVIF PYVSKKYPKL
RLHILGREAD TKLSQLAGPT ICVHGFVHDL EKALAQFRVF ICPMTYGAGM KGKLGEAMAN
GLPIVATTIG AEGFDLIDGE NCFIADFPEE FAQKTIQLYE NEILWNNFST NCRNLIQQNF
SYEPVAKLLR ELIFSFKPAS ILLTHEQAGK DFENKPPNKN ILTSNSFTTV HKIESYLSSI
NWLHKLFDYS SHFDYAEIIN DNKIPAVSVI IISWRLHPDT TNCLQILKKQ RTQPFEIIFV
DNGSDLGIFD ALKPNIDTYV RLNSNSGAYL ARNIGSIFAK SPILFFLDDD AIPADNIIDS
HLSCYTKFDV IAVRGVCKPK TNNPLNQQAK HYYLGPKPFP IYADIEGNTS YLASAFFKAD
GWDDAIRFGG GGVDLSRRLL EIEPDMRKQI YSPDPIIFHD FASDQSHLEM KREKQRQSRA
RLKKKHPDYN EFIESWKHFR NNEEVLLLKS GASFVRTPNA NYRKIKSSKV IENPLISICI
PTYNRENFIS SAIKSAANQS YKNCEIIVVD DGSTDNTRDI VLSYGIKNLK YIQKEHTSAP
DTRNRCIFES SGDFILWLDS DDFISSKIIE EYVNLMDSFS DVDIFYSNHF CIDEKGYVLK
QYSHIDWHNK NDEMLRRFMT KNPLPNLGTL VRKSIYSEIG EYDINFLRAH DMEFWSRVAL
AGKFTCKHVD KYLNYIRFHN NNITGIKNPI KTDFSYEAKI TNNILEKTKI ENLFNNLNWK
NEKLIAFQTA YLKIIDRFIE IYALNDALLT CEKYLINDHS NSSLLKKKKY ILELMNDFQS
HHAIFSQIMK KTQTRYIDEY FNFVKSMNIQ GTEKNHNFEL NDSDIITLLT KHAKKYFALK
NYNISLYLYL ALSHFDPVNS NLLKIISMHY LMLGDPINAM HYISQASTLS PSDKEIADLL
FQTKKCITLR SKVAIP