Gene Dbac_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0100 
Symbol 
ID8375733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp120242 
End bp121630 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content65% 
IMG OID644999329 
Productglycosyl transferase family 9 
Protein accessionYP_003156645 
Protein GI256827917 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGC CCATCCTGGT CATCCAGATG CAGCGCATGG GGGACCTGAT CCTGTCCTTC 
CCCCTTTTTT TGTGGCTGGA GCGGGCATTT CCCGGCCACC CGGTCTGGGT CATGGCTGAG
CCGGGTTTTG CCAGGCCGCT TGCGCGCCTG AGTCCGCAGG TGCGCTATTT CGGTTATGGG
CAGGGCGGGG ATGTGCGCAG CGAAGCATTC CATCTGGTCA TAAATCTCAG TCACCGGGCT
GAAAGCATGG CTTTGGCCGG CAGTCTGCGC TGCGACGCCC TGGTTGGCGG TTACCTTCGG
GACGGAGTGA CCCGCATCAA GGGAGACTGG CAGGAATACC GGGCGTCGCT GACCCACAAC
AACCGGCACA ACCGTTTTCA TTGGGCCGAT CTCAATGCCC TGGACGTGAT CCCGCACGGG
ATCATGGACC AGACCCGCTG GCCCGCGCCG CGTCAGATGC CCCCGGACAT TCGTCATGTC
GGCCTGTTTC TTGGCGCAAG CGAACCGGAC AAAAGGCCCA GCGCCGCGTT TTGGGTCGGA
CTCATCGCGG AGCTGGAGCG GCGAGGGCTC GTCCCGGTGC TTCTGGGCGG ACCGGGCGAG
CGGGAATTGT GCCGCGAGGT GCTTCGTCTC GCCGCGCGAC CGGTGGCCAG CGCCTGCGGG
TCCCTGGGAC TGGATGCGTT CGCCATGTAC GGGCAGAGTC TGGCCGCCAT GATCACCCCC
GACACCGGAC CCATGCATCT GGCGGCCTGG TCCGGCCTCA AGGTGCTCAA TCTGTCCATG
GGCCCGGTGC ATGCCTTTGA GACCGGCCCC TACCAGCCGG GGCACGTGGT GCTGCGCAGT
TCAAGGGATT GCGTTGGTTG CTGGCGCTGC CGTTTTGATC TTCCGCGTTG TCATGAACGA
TTCAAGCCCG CACGGGTGGC CCGGGTGCTT GAGGCCATGC TTGGCTGCAA GGGCAACCTC
TCAGGGTTGC GGCTTCCCGG ACTTGAGATT TTTGCCACCG GCCGCAAGGG CGGCCTCTAT
GACCTGATAC CCCTCTCCGC CCACGCCAAG GCCGGGCAGC GACTGTCCGC ATACTGGCAG
GCATTCTGGC TGCACGCCTT TGGGCGAGGC TCCCTGGACG ACTGTCTGGC TGCGGCCGGG
AAGCTGCGCG ATGACCATGC CGCCCTGGTG CGCGTCATGA CCGCCGGGGC TTTGCGTTTT
TTCCGCATGG CCAGCAGCGC CTCCGACCCG GAGCTGCCCA TGCGCGAGTG GAACCGCACG
TCTTTGGCGC TGCGCCCCTT AAGCGGGTAC GCCGCCGTTC ACCTGTCCAA TCATGACTGC
TCCGTGGCTA GCCGCAAGCG CGTGCTGGCC CTGGCCGAGG CGCACCTCGG CTTTCTTCGC
CAATCGTGA
 
Protein sequence
MKKPILVIQM QRMGDLILSF PLFLWLERAF PGHPVWVMAE PGFARPLARL SPQVRYFGYG 
QGGDVRSEAF HLVINLSHRA ESMALAGSLR CDALVGGYLR DGVTRIKGDW QEYRASLTHN
NRHNRFHWAD LNALDVIPHG IMDQTRWPAP RQMPPDIRHV GLFLGASEPD KRPSAAFWVG
LIAELERRGL VPVLLGGPGE RELCREVLRL AARPVASACG SLGLDAFAMY GQSLAAMITP
DTGPMHLAAW SGLKVLNLSM GPVHAFETGP YQPGHVVLRS SRDCVGCWRC RFDLPRCHER
FKPARVARVL EAMLGCKGNL SGLRLPGLEI FATGRKGGLY DLIPLSAHAK AGQRLSAYWQ
AFWLHAFGRG SLDDCLAAAG KLRDDHAALV RVMTAGALRF FRMASSASDP ELPMREWNRT
SLALRPLSGY AAVHLSNHDC SVASRKRVLA LAEAHLGFLR QS