Gene Dbac_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0093 
Symbol 
ID8375726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp110795 
End bp111790 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content63% 
IMG OID644999323 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003156639 
Protein GI256827911 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.851144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTCA AAATCGCACT TAACGGCTTT GGTCGCATCG GACGCTACCT GGCCCGCATT 
CTGGCCGGAA ACACGGATGT CGAACTGGTC TGCGTCAACG CGCGCGGCGA CAACGCGTCG 
CTGGCGTATC TGCTCAAATA CGACTCCGTC CACGGCACCT TTGCCGGTGA GGTCGAGCCC 
AACGAACAGG GTTTTCTGCT GAACGGAAAG CAGGTGCTGG TCACCCGCAA CGCTCCCGAC 
GCCTGGGACT GGAAGGGCAT CGACATCGTG GTCGAATCCA CCGGCAAGTT CACGGACCGC 
GAAAGCTGCG AGAAGCATCT GGCCGCCGGC GCAAAAAAGG TGCTGATCTC CGCCCCCGGC 
AAGAACGCCG ACCTGACCGT GGTCATGGGC GTCAATGACG GCCTCTACGA TCCGGCCAAG 
CACAACATCA TCTCCAATGC CTCCTGCACC ACCAACTGTC TGGCACCTGC GGCCAAGGCG 
TTGAACGACA CCTTCGGCAT CAGGCACGGT CTCATGACCA CCATCCATTC CTACACCATG 
AGCCAGCGCA TGCTCGACGG CACCCACAAG GACATCCGCC GCGGTCGTGC CGGGGCCATG 
AACATGCTGC CCACGACCAC GGGCGCGGCC AAGGCCGTGA GCATGGTCAT CCCGGCCCTG 
GCGGGCAAGC TCGATGGCAT GGCCGTTCGC GTGCCCACGC CCAACGTGTC GCTGGTGGAC 
CTGGTGGTGG AAGTGGAGAA GAAGGCCACC GTGGCCGAGG TCAACGCCGT CCTGAAGGCC 
GCGGCCAGCG GACCCGAAGG CGGGGCCATG GGCTACACGG AAGTGCCGCT CGTTTCCATG 
GACTACGTCG GCAGCATCTA CGGCGGCGTG GTCGACGGCC TGTGCACCTC GGTCATGAAC 
GGCACCATGG TCAAGATCAT CGTCTGGTAC GACAACGAGG CCGGTTTCAC CAACCAGCTG 
CTGCGCCTGA TCAAGACGGT CGGAGCATCT TTGTAA
 
Protein sequence
MAVKIALNGF GRIGRYLARI LAGNTDVELV CVNARGDNAS LAYLLKYDSV HGTFAGEVEP 
NEQGFLLNGK QVLVTRNAPD AWDWKGIDIV VESTGKFTDR ESCEKHLAAG AKKVLISAPG 
KNADLTVVMG VNDGLYDPAK HNIISNASCT TNCLAPAAKA LNDTFGIRHG LMTTIHSYTM 
SQRMLDGTHK DIRRGRAGAM NMLPTTTGAA KAVSMVIPAL AGKLDGMAVR VPTPNVSLVD 
LVVEVEKKAT VAEVNAVLKA AASGPEGGAM GYTEVPLVSM DYVGSIYGGV VDGLCTSVMN 
GTMVKIIVWY DNEAGFTNQL LRLIKTVGAS L