| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0088 |
|---|
| Symbol | |
|---|
| ID | 8375721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 106522 |
|---|
| End bp | 107670 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644999318 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha |
|---|
| Protein accession | YP_003156634 |
|---|
| Protein GI | 256827906 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAA AAAAGCGTAA GAAAACGGAA ATATTCGCCC TCGGCAACGA GGCTGTGGTC
GAGGGTGCGC TCCTGGCGGG CTGCAACTTC TATGCGGGCT ACCCCATAAC GCCGTCCACG
GAAATCGCGG AGGTCATGTC CTCGCGGCTG CCCCTGGTCA AGGACGGGGT GTTCATCCAG
ATGGAAGACG AGATCGCCAG CATGGGCGCC GTCATCGGTG CGTCCCTGGC CGGACGCAAG
GCCATGACCG CGACTTCGGG ACCTGGTTTT TCCCTCATGC AGGAGAATCT CGGCTACGCC
TGCATGACCG AAGTGCCCCT GGTCGTGGTC AACGTCATGC GCGGGGGACC CAGCACCGGG
CTGCCGACAA GCCCGGCCCA GGGCGATGTG CAGCAGGCCC GCTGGGGCTG TCATGGTGAT
CATCCCATCA TCGTCCTCTC GGCCAGCGAC GTGCAGGAAT GTCTGGAAAT GACCGTGGTC
GCCTTCAATT TCGCCGAAAA ATACCGCACG CCCGTTATCC TGCTTCTGGA TGAGATCACG
GCCCACACCC GGGAAAAGAT CTCCATCCCC GGGCCGGAGG ATTTTGAGAT CCTGGCGCGG
GTCACTCCGT CCATGCCGCC TGAATGGTAC GTCTCCTACG AGGAGACCAT GCGCGGGGTC
CCGGCCTTGC CGCCGCTCGG CTCCGGGTAC CGTTTCCATG TCACGGGCCT GACCCATGAC
CAGAACGGAT TCCCCACTTC CAAGCCGGAC GAGGTCAAGG CGCTGATGCA CCGTCAGTTC
CGCAAGATCG ACCAGTTCTT TTACGATATT CAGCTTTTTG ACGAGGTTGG TTGCGAGGAC
GCCGAAGTGG TCGTCGTGGC TTACGGCTGC GTGGCCCGTT CGGCCGAGCT TGCCGTGCAC
ATGGCCCGCG AGCGCGGGGT CAAGGCGGGG CTTCTGAAGC TCAAGACCCT GTTTCCCTTT
CCCAAAACCG CGGTGCAGAC CCTGGCCCGG CAGTGCAAGG CGCTCATTGT GCCGGAGATG
AACATGGGCC AGATCTCGCG CGAGGTGAAG CGGGTCAACA ACGGCCTGAC CCACGTCATT
ACCAACAACC GCGTCGACGG CCAGATCATC ACCCCTTCGG AAATCTTCAA AAACATCATG
CAGGCGTGA
|
|---|
| Protein sequence | MATKKRKKTE IFALGNEAVV EGALLAGCNF YAGYPITPST EIAEVMSSRL PLVKDGVFIQ
MEDEIASMGA VIGASLAGRK AMTATSGPGF SLMQENLGYA CMTEVPLVVV NVMRGGPSTG
LPTSPAQGDV QQARWGCHGD HPIIVLSASD VQECLEMTVV AFNFAEKYRT PVILLLDEIT
AHTREKISIP GPEDFEILAR VTPSMPPEWY VSYEETMRGV PALPPLGSGY RFHVTGLTHD
QNGFPTSKPD EVKALMHRQF RKIDQFFYDI QLFDEVGCED AEVVVVAYGC VARSAELAVH
MARERGVKAG LLKLKTLFPF PKTAVQTLAR QCKALIVPEM NMGQISREVK RVNNGLTHVI
TNNRVDGQII TPSEIFKNIM QA
|
|---|
| |