| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0039 |
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| Symbol | |
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| ID | 8375672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 59660 |
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| End bp | 60556 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644999269 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_003156585 |
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| Protein GI | 256827857 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA ACGACGCAAA TGACGATAAG ACAATGCTCA ACACGGGCCT GGCCCGGATG
TTCAAGGGCG GGGTGATCAT GGACGTGGTG AACGCGGATC AGGCCCGCAT CGCCGAAGAG
GCCGGGGCCT GCGCGGTCAT GGCCCTGGAG CGGGTTCCCG CCGATATCCG GGCCTGCGGC
GGCGTGGCCC GCATGTCCGA TCCGTCCATG ATTCGCGAGA TCATGGCGGC GGTTTCCATT
CCGGTCATGG CCAAATGCCG CATCGGCCAC TTCATGGAGG CCCGCATTCT TGAGGCCGTG
GGCGTGGACT ACATCGACGA GAGCGAGGTT TTGACCCCGG CGGATGAGGA ATTTCATATC
GACAAGCACG CATTCAAGGT GCCGTTTGTC TGCGGCTGCC GCAATCTGGG CGAAGCATTG
CGCCGCATTG CCGAGGGCGC GGCCATGATC CGCACCAAGG GCGAGGCGGG TACCGGGGAT
GTGGTCGAGG CCGTGCGCCA TGCCCGGGCC GTGCAAAGCC AGGTCAGGCT GGTGCGCGGC
ATGCCCCCCG AAGAGCTGGT CACCTATGCC AAGGAGATCG GCGCGCCCGT GGAACTGCTG
CGCCGGGTGC GCGAACTCGG GCGATTGCCC GTGGTCAATT TCGCGGCCGG CGGGGTGGCC
ACGCCGGCCG ACGCCGCCCT CATGATGCAG CTCGGCATGG ACGGGGTTTT CGTGGGGTCG
GGGATTTTCA AGAGCGGCGA TCCGGCCAGG AGAGCGCGGG CCATTGTGCA GGCGGTGACC
CACTTCGACG ATCCGTCCAT TCTGGCCCGG GTCAGCGAAA ATCTGGGCGA GGCCATGTCC
GGTATCGCGG TTCGGTCTCT GGCCGCCGCG GAGCAGTTCG CAGGCCGGGG CTGGTGA
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| Protein sequence | MKPNDANDDK TMLNTGLARM FKGGVIMDVV NADQARIAEE AGACAVMALE RVPADIRACG
GVARMSDPSM IREIMAAVSI PVMAKCRIGH FMEARILEAV GVDYIDESEV LTPADEEFHI
DKHAFKVPFV CGCRNLGEAL RRIAEGAAMI RTKGEAGTGD VVEAVRHARA VQSQVRLVRG
MPPEELVTYA KEIGAPVELL RRVRELGRLP VVNFAAGGVA TPADAALMMQ LGMDGVFVGS
GIFKSGDPAR RARAIVQAVT HFDDPSILAR VSENLGEAMS GIAVRSLAAA EQFAGRGW
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