| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0034 |
|---|
| Symbol | |
|---|
| ID | 8375667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 53728 |
|---|
| End bp | 54897 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644999264 |
|---|
| Product | peptidase M20 |
|---|
| Protein accession | YP_003156580 |
|---|
| Protein GI | 256827852 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGG CCATGCACGA CGCGATCCTG TCCTATCTTG AGCCCCGCCG CAGGGAGGCC
CTGGATCTTT TGCAACGGCT GGTGGAAATC CAGAGCGGGA GCCGCAACAA GCCCGGTCTG
GACCGCATGG CCGTGGACGT GGCCGAAGTT CTTGGCGGCA TCCTGCCCGA GGCGCGCATC
CTGCCTTTCA CGGAGCACGG GAACATGGTC CAGGGCATGA CCCTCCCGGC CGCAAGGGGA
GAGAAGGGCA TCGTGCTGGT CGGACACATG GACACGGTCT TCCCCGCAGA CACCAGTTTC
ACCGCGTTTC GTGAAGACGA AGAGCGCTGC TTCGGCCCGG GCGTCTATGA CATGAAAGGC
GGCCTCGTGG TCGCGTTCTA CGCCTTGAAG GCCCTGTCCC AGCTGGGGCT GCTGGAGGAG
ATACCCGTCA CCGTACTGTG CAATTCCGAC GAGGAGATCG GCTCGCCCGC TTCCCGGCCC
TGGATCGAAG AACAGGCGAA GGGAGCCTTG GCCGCCCTGG TTTTCGAGGG CGGCGGGGCA
AACAACGACG TGGTCACCGG TCGCAAAGGG CGGCTCGGCA TGCACCTGAC CGTGCGCGGC
CGGGCCGGGC ATGCGGCCAA AGGCGGGGCC AAGGCCAGCG CCATCCTGGA GCTGGCGCAC
AAGATCATCG CCCTGGAAGG CTTGAACGAC GGTCGCGAGA TCACGCTCAA TGTCGGGCAA
ATCACGGGGG GCATCGGCCC GAACACCGTG CCCGAACTTG CCACGGCGGC TCTCGATGCC
CGTTTCCTGA CCCCGGACGG CCAGCTGCGG CTTGAACAGA ACCTGGCCCG GATTGCCGCC
AAAGAAAGCG TCGGTGGAAC CTCAACCACC CTGAGCGTAC AGTCCGGACG CCCGGCCATG
CCGCAATCCG AGGGCAACCG GCGGCTCTGG AGCATCGCCC GCGAGCAGGC ACATCTCCTC
GGCTACGACC TGCCGGAAGA GCTGCGCTCC GGCGTTTCCG ACGCCAACTT CATTGCCGGT
CTGGGCGTGC CCGTTCTCGA CGGGCTGGGC CCGGTGGGCG ATCTGGACCA CAGCGATCTG
GAGTTTATTC TCAAAGATTC CCTCTGCGCC CGGGCGGCGC TCACCGCCAC GACCATCACA
GCAATCTGGA ATCATGCGCA AAGCGGCTGA
|
|---|
| Protein sequence | MIPAMHDAIL SYLEPRRREA LDLLQRLVEI QSGSRNKPGL DRMAVDVAEV LGGILPEARI
LPFTEHGNMV QGMTLPAARG EKGIVLVGHM DTVFPADTSF TAFREDEERC FGPGVYDMKG
GLVVAFYALK ALSQLGLLEE IPVTVLCNSD EEIGSPASRP WIEEQAKGAL AALVFEGGGA
NNDVVTGRKG RLGMHLTVRG RAGHAAKGGA KASAILELAH KIIALEGLND GREITLNVGQ
ITGGIGPNTV PELATAALDA RFLTPDGQLR LEQNLARIAA KESVGGTSTT LSVQSGRPAM
PQSEGNRRLW SIAREQAHLL GYDLPEELRS GVSDANFIAG LGVPVLDGLG PVGDLDHSDL
EFILKDSLCA RAALTATTIT AIWNHAQSG
|
|---|
| |