| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0032 |
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| Symbol | |
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| ID | 8375665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 50355 |
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| End bp | 52568 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644999262 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_003156578 |
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| Protein GI | 256827850 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.764201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAC ACGAAACACC CAAACAAGAC AACGCCGCCC CCGGCCAAGA GTCTTCCGCC
AGCATGAAAC AGGCAGCCGA AGACCTTGTG GCCATGGTCG AAGCAGGCGC GCGGGAACCC
TCGAATTTTT TCGCCTCCGG CGTGATCACG TTTTTGTGCC TGTGCTGGTC CTGCTTCCAG
CTCTACCTGG CCTACCAGCC CCTGGACTCG CATATCGCCC GGGCCTGGCA TCTGGGTTTT
GCGGTGTGCC TGGCCTTCCT GGCCTATCCT GCCTACAAGC AGCATACCCC GCCCATGTGG
GTAAAATGGA CCAGAAAAGT CATCCCCAAT TTCGCCAGGC GCTCCATACG TACCTACATT
CCCTACTATG ACATGATCCT TGCGGCGCTG GCCACGGCCG GTGCGCTGTA CATCTGGTGG
GATTACGACC AGCTCATCAA CCGCCAGGGC CTGCCCAACA CCATGGACAT CTGGATGGGC
ATCATCCTGA TCGCGCTGCT GCTTGAGGCC GCCAGGCGCT CCCTCGGGCC CGCCCTGACC
ATCCTTGGCG GCATCTTCAT GGGCTACACT GTTTTCGGCC CCTACCTGCC CGAAGTGCTG
CGTCATCGCG GCGTGCCGCT CGATTTCATC ATCAGCGACA TGTATCTGAC CACCACCGGC
ATATTCGGCG TGCCGCTCGG CGTGTCGACG GATTTCGTCT TTCTTTTCGT CCTCTTCGGC
GCCCTGCTCG ACCGTGCGGG CGGAGGAAAA TATTTCATCG ACGTGGCCTT CTCGGCGCTG
GGCACCTTTC GCGGCGGTCC GGCCAAAGCC GCGGTCCTGG CCTCGGGCCT GACCGGCCTG
GTCTCGGGCT CGTCCATCGC CAACACGGTG ACCACCGGCA CCTTCACCAT CCCGCTGATG
AAAAAGGTGG GCTTTCCGGC CTACAAGGCC GCGGCCGTAG AAGTGGCGGC CTCCACCAAC
GGGCAGCTCA TGCCTCCGGT CATGGGCGCG GCGGCCTTCA TCATGGCCGA AATCATCGGC
ATCCCCTATC TCGATGTCGT CCGTGCAGCC TTCCTGCCCG CGATCATTTC CTATCTGGCC
CTGTTCTGGG TCGTGCACGT CGAATCCATG AAGATGGGCA TCAAGGCCAT CCCGCGCAGC
CAGCTTCCGC CCTTCTTCAA GACCTTGGTG CGGGGCTGTC ACTTCATCAT CCCGCTGGCG
GTACTGATCT TTTTCCTGGT GATCGTGCGT CGCTCACCCG TGACCTCGGC GCTTCTGGCC
ATCGAGAGCC TGACCGTGAT CATGCTGGTG CAGCGTCCGA TCATCGCATT TTTGACCATG
GGCGCCCATC GCCGCGCCGG TACCCTGGAC CCGGCCGTAG ACACCAAACG GTTCATCGCC
GCCGCTGCCT GGCAGGGCCT CGTCGACATC TGGAACGGCC TGATCATGGG CGCGCGCAAC
ATGATCTCCG TGGGCGTGGC CACTGCCACG GCCGGAATCA TCGTCGGCGT GGTGACCATC
ACCGGCCTTG TCGGCCGTTT CATCACCCTC ATCGACACCA TCTCCATGGG CAACGTGGTC
CTGATGCTCA TCTTCACGGC CATAACCAGC CTGATCCTAG GCATGGGCAT GCCGACCACG
GCCAATTACA TCATCATGGC CACCCTGACC GCGCCGGTCA TCGTGCAACT CGGGGCCGAC
GCAGGGCTTG TCTTTCCCCT CGTCGCGGCC CACCTGTTCG TCTTCTATTT CGGCATTCTC
GCCGACGACA CGCCTCCGGT GGGGCTCGCC GCCTACGCGG GGGCGGCCAT CGCGCGCTCC
GACCCGATTA AAACCGGTGT GCAGGGTTTC GCCTATGACC TGCGCACCGC GATCCTGCCC
TTCATCTTCC TCTTCAACAC CGATCTCTTG ATGATTTCGG GCGTGACAAG CACAGGAGAC
ATCATCTGGC TGGACGACTA CCTGCACATC GCCTGGATCT TCTTTTCCGG AACGATCGCC
ATGTTCGCAT TCGCCTCGGC GATCCAGGGC TGGCTGGTCA AAAGCTGCAG CTGGGTCGAG
CGCCTTGCCC TGCTGGCCAT TTGCGCCACG ACCTTCCGTC CGGGCGCCTT TGCGCCGTAC
CTGCCCTTCG ACCGACTGGG AATGCAGATT CTGGGAGTTT GCGTTTTCTT CCTTTTGGTC
GCTTGGCAAA TGTCGCAAAA AAAGACTAAG AAAAAGAAAA AAGTCACCAC CTAA
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| Protein sequence | MAEHETPKQD NAAPGQESSA SMKQAAEDLV AMVEAGAREP SNFFASGVIT FLCLCWSCFQ
LYLAYQPLDS HIARAWHLGF AVCLAFLAYP AYKQHTPPMW VKWTRKVIPN FARRSIRTYI
PYYDMILAAL ATAGALYIWW DYDQLINRQG LPNTMDIWMG IILIALLLEA ARRSLGPALT
ILGGIFMGYT VFGPYLPEVL RHRGVPLDFI ISDMYLTTTG IFGVPLGVST DFVFLFVLFG
ALLDRAGGGK YFIDVAFSAL GTFRGGPAKA AVLASGLTGL VSGSSIANTV TTGTFTIPLM
KKVGFPAYKA AAVEVAASTN GQLMPPVMGA AAFIMAEIIG IPYLDVVRAA FLPAIISYLA
LFWVVHVESM KMGIKAIPRS QLPPFFKTLV RGCHFIIPLA VLIFFLVIVR RSPVTSALLA
IESLTVIMLV QRPIIAFLTM GAHRRAGTLD PAVDTKRFIA AAAWQGLVDI WNGLIMGARN
MISVGVATAT AGIIVGVVTI TGLVGRFITL IDTISMGNVV LMLIFTAITS LILGMGMPTT
ANYIIMATLT APVIVQLGAD AGLVFPLVAA HLFVFYFGIL ADDTPPVGLA AYAGAAIARS
DPIKTGVQGF AYDLRTAILP FIFLFNTDLL MISGVTSTGD IIWLDDYLHI AWIFFSGTIA
MFAFASAIQG WLVKSCSWVE RLALLAICAT TFRPGAFAPY LPFDRLGMQI LGVCVFFLLV
AWQMSQKKTK KKKKVTT
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