| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_0005 |
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| Symbol | |
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| ID | 8375636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 6264 |
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| End bp | 8480 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644999233 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_003156551 |
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| Protein GI | 256827823 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.4635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATC CCAAGGTCGC CATTCCCATC TCCGCTCCCC AGTCAGCCGC CAAGCCGCGC
CCGACGATCA CCGCCCAGAT CAACCCCTCG CAGGTCTATT TCACCCCGCC GCTGGTTGGG
TGTTTGTCCG TCATATCCCG CATGCAGGGC CGCCCCGTCA GCACCACGGC GCTGGAAGCG
GGCCTGCCGC GCACGCAGGA AGGCATGACC CCGTACGCGG TGATCCGCGC GGCGCGGCGC
GAGGGCATCG ACGCCCAGAT CACGCACAAG CCGGCCATTG ATAAAATTTC CCCCCTGAAC
CTGCCCTGCA TCCTGCTCAT GCAGGACGGC TCGGCCTGCG TACTGGTCAG CGTGGCGTCC
GGCACGGCCC GCATCATCAT GCCCGAGAAC CCGGACGCGC CCTTTGACAC CCCGGTCGAA
AAGCTGAGGG AAACCTACAC CGGACACGCC GTCTTCGCCC GCCCCAAAGC GAGTCTGGAC
GGCAGGACCG AAGGGCTGAA GATCTTCAAC ACCAAGCAAT GGTTCTGGGG CACCATTTTT
CATTTTCTGC CCATTTACCG GCACGTCATC CTGGCCACGG TTTTCATCAA CCTGCTGGCC
ATCGCCTCGC CTCTTTTCAC CATGAACGTG TACGACCGGG TCGTACCCAA CAATGCGCTG
GAAACCTTGT GGGTGCTGGC CGTGGGTGTC GGCATCGCCT TCTTTTTCGA TTTTGCGCTC
AGGAACCTGC GCGGCTATTT CGTGGACGTG GCCGGACGCA ATTCCGACAT CCTGGTCGCC
AGCAAGCTGA TGAGCCACAT CCTGTCCATC CGGCTCGACC ACAAGCCCGA ATCCACAGGG
GCGCTGGTCA ACAACATGCG CGAGTTCGAT TCCCTGCGGG AGTTCTTCAG CTCCACCACC
CTGCTCGCGC TGGTGGATCT GCCATTCCTG ATCCTGTTCA TTACCATCAT CTTCTACATC
GGCGGCCCCA TAGCCATTGT GCCGGGCGTG GTCGCGCCCA TAGTCATCCT GGTCGGCATC
ATCATGCAGG GCCCCCTGAA GCGCGCCATA GAAGGCGGTT ACAAGGAATC GACGCAGAAA
AACGCCTTGC TGGTTGAAAC CGTGAGCGGC CTTGAGACCA TCAAGACCAG CCGGGCCGAA
GGCTCCATGC TCGGCCGCTG GGAGAACATC GTCGGCATGG GCGCCAAATC GGCCATCCGC
TCCAAGTCGC TCAGTACCTT CTCCCTAAGT TTCACCCAGT TCGCATCCCA GATCGTCTAT
TGCGGCGTCA TCATCTGGGG CGTGTACCGA ATCTCCGAAG GCGAGATGAC CATGGGCGGG
CTCATCGCCT GCTCCATCCT CGTCGGCCGG GCCATGGCTC CGCTGGGCGC GGTGGCGGCC
ATGCTGACCC GCCTGCAACA GAGCCGCATG GCGCTCAAGA ACCTGGACCT GCTCATGCAG
ATCCCAAGCG AGCGCCCCGA TGACGTCCAG CATCCGGAAC ATCAGGACCT TCGCGCCACC
ATCACCTTCG AGGATGTGAG CTTCAAATAC CCCAGCGCCC TGACCAACGC CCTGTCCCAC
ATCGGCCTGC ACATCGCCCA GGGCGAGCGC GTGGCGATCA TCGGCAAGAT GGGTTCAGGC
AAGACCACGC TGGGCAAGCT GATCAACGGC CTCTACGAGC CGCAGAAAGG GGCGGTGAAG
ATCGGGGGCC TCGATATCCG CCAGATCGAT CCGGCCGAAC TGCGGGCCAA GATCGGCTAC
ATGGCCCAGG ACAATTTTCT GTTCCACGGC ACGGTGCGCG AGAACATCAC TCTCGGCGCG
CCCCACGTCA GCGACCAGGC GCTGCTGCGC GCTGCGACCA TCGCCGGAGT CACCGACTTC
ATCAAAAACA ACCCCGCCGG CTTCAACCTG CAGGTCGGGG AACGGGGGTT GTCCCTGTCC
GGCGGCCAGC GCCAGGCCAT CACCATCGCC CGCACCCTGC TGCTCGACCC CGACATCGTC
ATTTTGGACG AACCGAGCAG TTCCATGGAC GTGGGCGTGG AGGCCGTGCT CAAACTTCGC
CTCTCCTCGG CCCTGAAAGG CAAGACCCTC ATCCTCATCA CCCACAGACC GAGCCTGTTG
TCCCTGGCCA CACGGGTCAT CGCCCTTGAG GGTGGGTCAA TCATCGCCGA CGGACCGCGC
AATGAAGTTC TGGCCGAACT GCAAAAACGC GGTAACGGAG CCAAAAATGC GCAATAA
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| Protein sequence | MNDPKVAIPI SAPQSAAKPR PTITAQINPS QVYFTPPLVG CLSVISRMQG RPVSTTALEA
GLPRTQEGMT PYAVIRAARR EGIDAQITHK PAIDKISPLN LPCILLMQDG SACVLVSVAS
GTARIIMPEN PDAPFDTPVE KLRETYTGHA VFARPKASLD GRTEGLKIFN TKQWFWGTIF
HFLPIYRHVI LATVFINLLA IASPLFTMNV YDRVVPNNAL ETLWVLAVGV GIAFFFDFAL
RNLRGYFVDV AGRNSDILVA SKLMSHILSI RLDHKPESTG ALVNNMREFD SLREFFSSTT
LLALVDLPFL ILFITIIFYI GGPIAIVPGV VAPIVILVGI IMQGPLKRAI EGGYKESTQK
NALLVETVSG LETIKTSRAE GSMLGRWENI VGMGAKSAIR SKSLSTFSLS FTQFASQIVY
CGVIIWGVYR ISEGEMTMGG LIACSILVGR AMAPLGAVAA MLTRLQQSRM ALKNLDLLMQ
IPSERPDDVQ HPEHQDLRAT ITFEDVSFKY PSALTNALSH IGLHIAQGER VAIIGKMGSG
KTTLGKLING LYEPQKGAVK IGGLDIRQID PAELRAKIGY MAQDNFLFHG TVRENITLGA
PHVSDQALLR AATIAGVTDF IKNNPAGFNL QVGERGLSLS GGQRQAITIA RTLLLDPDIV
ILDEPSSSMD VGVEAVLKLR LSSALKGKTL ILITHRPSLL SLATRVIALE GGSIIADGPR
NEVLAELQKR GNGAKNAQ
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