Gene Bfae_27310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_27310 
Symbol 
ID8401276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3054379 
End bp3055542 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content74% 
IMG OID644998772 
ProductExodeoxyribonuclease I subunit D 
Protein accessionYP_003156092 
Protein GI257069837 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00866109 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCC TGCACACCTC GGACTGGCAC CTCGGGCGCA CCCTGCACAA GGTCGACCTG 
CACGAGCACC AGGCCGCGTT CCTCGACTGG CTCGTGGAGC TGGTGCGCGC CGAGGAGGTC
GACGTCGTGG TCATCCCGGG AGACGTGTAC GACCGCGCCG TCCCCGCCGT GACCAGCGTG
ACGCTGCTGG ACAGCGCCCT GGCGCGCCTG GCCGACACCG GCGCCACCGT GGTGCTGACC
TCCGGCAACC ACGACTCCGC GGAGCGGCTC GGCTTCGGCC GCTCGCTGAT GCGCTCCGGC
GTCCACCTGC TCACCGACGT CCCCGGCATC GAGCACCCCG TCACCGTCGC CGACGAGCAC
GGCGAGGTGC TGTTCTTCGG CCTGCCCTAC CTCGAACCGG ACCGCGCCCG CACCGAGCTG
GTCGCCGAGG GGGAGGCCCC CCTGGCCCGC AGCCACGAGG CCGTCACCCG CGCCGCCCTG
GACCGGGTGC GCGCACGTGC CGAGCACCGC CCCGGTGCCC GCACCGTCGT GCTCGCCCAC
ACCTTCGTCA CCGGCGGCGA GGGCAGCGAC TCCGAGCGCG ACCTCTCCGT CGGCGGCGTC
GACTCGGTGC CCGCCGGGGT GCTCGGCGGC ATCGACTACC TCGCCCTCGG CCACCTCCAC
GGCTGCCAGG ACCTCAGCCG CGCCGTCGGC GCCCCCGCCT GGTACTCCGG CTCCCCGCTC
GCCTTCTCCT TCTCCGAACG CCACCACCGC AAGTCCGTGC TGATGGTCGA GCTCGGCGCC
CCGGGCACCG AGGTCGAGGT CCGACGGATC GAAACACCCG TGCCGCGCCG TCTCACCGAG
CTGCGCGGCA CGCTCGCGCA GCTCCTCGCA CAGCGTGACG GGCACGCCGG GGACTGGGTG
AAAGCCGTCG TCACCGACCC GGCCCGCCCC GCCCACCTGC AGGAACAGCT GCGCGAGGCG
TTCCCGCACC TGCTGCTGAC CGAGTACGCG CCCGAGGGGC GGGAAGCCCG CGAGGGCACC
CCCGTGGTGC GGCGCGAGCA GAACCCGCTG GAGGTGATGG ACGAGTTCCT CGCCCACGTC
ACCGGCGCGG CCCCCACCGC CGCGGAGCAC GACGTGCTGG ACCGCGCCTA CAGCGCCGTC
CGCCGGGAGC GGGAGGCCTC ATGA
 
Protein sequence
MKILHTSDWH LGRTLHKVDL HEHQAAFLDW LVELVRAEEV DVVVIPGDVY DRAVPAVTSV 
TLLDSALARL ADTGATVVLT SGNHDSAERL GFGRSLMRSG VHLLTDVPGI EHPVTVADEH
GEVLFFGLPY LEPDRARTEL VAEGEAPLAR SHEAVTRAAL DRVRARAEHR PGARTVVLAH
TFVTGGEGSD SERDLSVGGV DSVPAGVLGG IDYLALGHLH GCQDLSRAVG APAWYSGSPL
AFSFSERHHR KSVLMVELGA PGTEVEVRRI ETPVPRRLTE LRGTLAQLLA QRDGHAGDWV
KAVVTDPARP AHLQEQLREA FPHLLLTEYA PEGREAREGT PVVRREQNPL EVMDEFLAHV
TGAAPTAAEH DVLDRAYSAV RREREAS