Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_27020 |
Symbol | |
ID | 8401247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 3019495 |
End bp | 3020226 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644998743 |
Product | sortase family protein, LPXTG-site transpeptidase |
Protein accession | YP_003156064 |
Protein GI | 257069809 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCA CCCACCGCCG CCGAGACCGC CGCGGCGGAG GGGTCCTCGG GATCCTCGGG GAGCTGCTGC TGACCCTCGG CGCCCTGCTG CTGCTCTTCC TCGTCTGGCA GCTGTGGTGG ACGGACGTCA TCGCCGACCG CGAGCAGGCC GGCATCATCG ACGGCCTCGA GCAGGAGTGG GGCGAGCTCG ACGCGGAGGA GATCGCACCC CGCCAGGAGG GCCCGCCGCC GATCCCCGAG ACCCCGCAGG ACACGATGGT CTGGGGCAAG ATGCACGTGC CGGCCTTCGA CCGGCCCCAG TTCCCGCTCG CCGAGGGCGT GAGCCTCGAG AAGGTGCTCA ACGTCAAGGG CGCCGGCCAC TACCCGGAGA CGGCGCTGCC GGGCGAGGTC GGGAACTTCT CGGTCGCCGG GCACCGCAAC ACCTACGGCC GCGTCTTCGA GGACATCGCC CGGCTCGAGA CGGGGGACGC GATCGTGGTG GAGACCTCCG ACGCGTTCTA CGTGTACGAG GTGAGCGAGT CGCTGGTCGT GCAGCCGGCG GACGTCGAGG TGATCGCGCC GACGCCCGGC CGGCCCGAGG TCGAGCCCAC CGCGCAGATG CTCACCCTGA CCGCCTGCCA TCCGATGTAC TCCGCGCGCG AGCGCTACAT CGTCCACGCC GAGTTCGCGT ACTGGACGGA CCGGGCCGAC GGGATCCCCG AGGCGCTCGC CACCGGTGAG GAGGAGGACT GA
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Protein sequence | MTPTHRRRDR RGGGVLGILG ELLLTLGALL LLFLVWQLWW TDVIADREQA GIIDGLEQEW GELDAEEIAP RQEGPPPIPE TPQDTMVWGK MHVPAFDRPQ FPLAEGVSLE KVLNVKGAGH YPETALPGEV GNFSVAGHRN TYGRVFEDIA RLETGDAIVV ETSDAFYVYE VSESLVVQPA DVEVIAPTPG RPEVEPTAQM LTLTACHPMY SARERYIVHA EFAYWTDRAD GIPEALATGE EED
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