| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_23930 |
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| Symbol | rpoB |
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| ID | 8400938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | - |
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| Start bp | 2669359 |
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| End bp | 2672847 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644998444 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_003155775 |
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| Protein GI | 257069520 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.268033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGCCT CGAGCACCGA TCGCACCACT GACATCGCAC TTCGTACCGT CTCGCCCCGC
GTCACCTTCG CGAAGCTCGG CGACCCCATC GAGGTCCCGG ATCTGCTGAG TCTGCAGACC
ACCTCGTTCG ACTGGCTGCT CGGCAACGAG CGCTGGCAGG AGCGTGCCGC TGAGGCCTCC
GCCGCCGGTC GCGAGGACGT CCCGCAGACC TCCGGTCTCG CGGACATCCT CGAGGAGATC
TCCCCGATCG AGGACTTCGC CGGCAACATG TCGTTGTCGT TCCGCGATCA CACCTTCGAC
GACCCGAAGT ACACGGTCGA CGAATGCAAG GAGAAGGACC TCACCTACGC CGCTCCGCTG
TACGTCATCG CGGAGTTCAT GAACAACGAG ACCGGTGAGA TCAAGACCCA GACGGTCTTC
ATGGGCGAGT TCCCGCTCAT GACCGACAAG GGCACGTTCA TCATCAACGG CACCGAGCGT
GTCGTCGTCT CCCAGCTCGT CCGCTCCCCG GGTGTGTACT TCGAGGAGTC CATCGACAAG
ACGAGCGACA AGCACATCTT CTCCGCGAAG GTCATCCCTT CGCGCGGTGC CTGGCTCGAG
TTCGAGGTCG ACAAGCGCGA CCAGGTCGGC GTGCGCATCG ACCGCAAGCG CAAGCAGTCC
GTCACCACCC TGCTGCAGGC CCTCGGCATG TCGCACAGCG ACATCCTCGA GGAGTTCGGC
GAGTTCGAGT CGATGCGCTC CACGCTCGAG AAGGACCGCA TCACCTCGCA GGACGAGGCG
CTCATCGACA TCTACCGCAA GCAGCGTCCG GGCGAGCCGC CCACGCGCGA TGCGGGCGAG
GCGATGCTGA ACAACCTCTA CTTCAACGCC AAGCGCTACG ACCTCGCGAA GGTCGGCCGC
TACAAGATCG GCAAGAAGCT CGGCCTCGAG GGCACCCTCT CCGAGTCCAC CCTCCGCCTC
CAGGACGTCG TCGCCGCGAT CAAGTACATC GTCGCGCTGC ACGACGGCGT CAGCGAGTAC
ACCAGCGTCG ACGGCAAGCC CGTGCGCGTG GAGACCGACG ACATCGACCA CTTCGGCAAC
CGTCGCATCC GCGCGGTGGG CGAGCTGATC CAGAACCAGG TCCGCACCGG CCTGTCCCGC
ATGGAGCGCG TCGTCCGCGA GCGCATGACC ACGCAGGACG TCGAGGCGAT CACGCCGCTG
ACCCTGATCA ACATCCGTCC GGTCACCGCC GCGATCAAGG AGTTCTTCGG AACCTCCCAG
CTCTCGCAGT TCATGGACCA GAACAACCCG CTGTCGGGCC TGACCCACAA GCGGCGCCTG
TCCGCGCTCG GCCCGGGCGG CCTGTCCCGC GACCGCGCCG GCATGGAGGT CCGTGACGTC
CACCCGTCGC ACTACGGCCG CATGTGCCCG ATCGAGACCC CCGAGGGTCC GAACATCGGC
CTCATCGGCT CGCTGGCGAC CTTCGCCCGC ATCAACCCCT TCGGCTTCAT CGAGACGCCG
TACCGCAAGG TGGTCGACGG CCACGTCACC GACGAGGTCG TCTACCTCAC CGCGGATGAC
GAGGACCGCC ACATCATCGC GCAGGCCAAC GCCAAGATCG ATGAGGAGGG TCGCTTCCTC
GAGGAGGAGG TGCTGGTGCG CCTCGCCGGC GGCGAGCCGG ACCTGGTCGC CGTCGAGGAC
GTCGACTACA TGGACGTCTC CGCCCGTCAG ATGGTCTCCG TCGCCACGGC GATGATCCCC
TTCCTCGAGC ACGACGACGC CAACCGTGCG CTCATGGGCT CGAACATGCA GCGCCAGGCC
GTGCCGCTGC TGCGGTCCGA GATGCCGCTG GTCGGCACCG GCATGGAGCG TCGCGCCGCG
GTCGACGCGG GCGACGTGAT CGTCGCGGAG AAGGGCGGCG TCATCGAGGA GCTCTCGGCA
GACCTCATCG TGGTCATGGC CGACGACGGC TCCCGCCAGA CGTACCCGAT CGGGAAGTTC
CAGCGCTCCA ACGCCGGCAA CTCCTACAAC CAGCGCGTGC TCTTCGACGA GGGCGACCGC
GTCGAGGCCG GCTCGATCCT GGCCGACGGC CCCTCGACCG ATCAGGGCGA GCTCGCCATC
GGCAAGAACC TGCTGGTCGC CTTCATGTCG TGGGAGGGCC ACAACTACGA GGACGGCATC
ATCCTGTCCT CGCGGATGGT CCAGGACGAC GTCCTCACCT CGATCCACAT CGAGGAGCAC
GAGGTCGACG CCCGCGACAC GAAGCTCGGC AAGGAGGAGA TCACCCGGGA CATCCCGAAC
GTCGGCGACG ACGTGCTCGC CGATCTCGAC GAGCGCGGCA TCATCCGCAT CGGCGCCGAG
GTCGAGCCGG GCGACATCCT CGTCGGCAAG GTCACCCCGA AGGGCGAGAC CGAGCTGACC
CCGGAGGAGC GCCTGCTGCG CGCGATCTTC GGCGAGAAGG CCCGAGAGGT GCGCGACACC
TCGCTGCGCG TGCCCCACGG CGAGTCCGGC ACCGTCATCG GCGTCCAGGT CTTCAACGAC
GACGAGGACG GGGACATCCT GCCCACCGGC GTCAACGAGA TGGTCCGCGT CTACGTGGCC
CAGAAGCGCA AGATCACCGA CGGCGACAAG CTCGCCGGCC GTCACGGCAA CAAGGGCGTC
ATCGCGAAGA TCCTGCCGGT CGAGGACATG CCGTTCCTGG AGGACGGCAC CCCGATCGAC
ATCATCCTCA ACCCGATGGG CGTGCCCGGC CGCATGAACA TCGGCCAGGT CATGGAGACC
CACCTGGGCT GGGTCGCCAA GGCCGGCTGG GACCTCGACC CGTCGGACGC GACCGCCGCG
GACCTGCCCG AGCCCGCGCT GCACGGCGAG CCCGGCACCC CGGTCGCCGT CCCGGTCTTC
GACGGCCTCA CGGCCGACGA GGTCTCCGGT CTGATCGCCA ACCACCGCCC CAACCGGGAC
GGCGAGCGGA TGATCAAGGA GGACGGCAAG GCGCGTCTGT TCGACGGCCG CTCCGGCGAG
CCGTTCCCGG ACCCGGTCTC GGTGGGCTAC ATGTACATGC TGAAGCTCCA CCACCTGGTG
GACGACAAGC TGCACGCCCG CTCCACCGGC CCCTACTCGA TGATCACGCA GCAGCCGCTG
GGCGGTAAGG CCCAGTTCGG CGGCCAGCGG TTCGGCGAGA TGGAGGTCTG GGCCCTGGAG
GCCTACGGCG CCGCGTACGC CCTGCAGGAG CTGCTGACCA TCAAGTCCGA TGACATCGCC
GGCCGCGTCA AGGTCTACGA GGCGATCGTC AAGGGCGAGA ACATCCCCGA GCCCGGCATC
CCGGAGTCGT TCCGCGTCCT GCTCAAGGAG ATGCAGTCGC TGTGCCTGAA CGTGGAGGTG
CTGTCCAGCG ACGGCACCGC CCACGAGGTC CAGGAGAGCG ACGAGGAGGT CTTCCGCGCC
GCGGAGGAGC TCGGCATCGA CCTGTCCCGC CGGCCCCACG AGGGCGTCGG CTCCATCGAA
GAGGTCTGA
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| Protein sequence | MAASSTDRTT DIALRTVSPR VTFAKLGDPI EVPDLLSLQT TSFDWLLGNE RWQERAAEAS
AAGREDVPQT SGLADILEEI SPIEDFAGNM SLSFRDHTFD DPKYTVDECK EKDLTYAAPL
YVIAEFMNNE TGEIKTQTVF MGEFPLMTDK GTFIINGTER VVVSQLVRSP GVYFEESIDK
TSDKHIFSAK VIPSRGAWLE FEVDKRDQVG VRIDRKRKQS VTTLLQALGM SHSDILEEFG
EFESMRSTLE KDRITSQDEA LIDIYRKQRP GEPPTRDAGE AMLNNLYFNA KRYDLAKVGR
YKIGKKLGLE GTLSESTLRL QDVVAAIKYI VALHDGVSEY TSVDGKPVRV ETDDIDHFGN
RRIRAVGELI QNQVRTGLSR MERVVRERMT TQDVEAITPL TLINIRPVTA AIKEFFGTSQ
LSQFMDQNNP LSGLTHKRRL SALGPGGLSR DRAGMEVRDV HPSHYGRMCP IETPEGPNIG
LIGSLATFAR INPFGFIETP YRKVVDGHVT DEVVYLTADD EDRHIIAQAN AKIDEEGRFL
EEEVLVRLAG GEPDLVAVED VDYMDVSARQ MVSVATAMIP FLEHDDANRA LMGSNMQRQA
VPLLRSEMPL VGTGMERRAA VDAGDVIVAE KGGVIEELSA DLIVVMADDG SRQTYPIGKF
QRSNAGNSYN QRVLFDEGDR VEAGSILADG PSTDQGELAI GKNLLVAFMS WEGHNYEDGI
ILSSRMVQDD VLTSIHIEEH EVDARDTKLG KEEITRDIPN VGDDVLADLD ERGIIRIGAE
VEPGDILVGK VTPKGETELT PEERLLRAIF GEKAREVRDT SLRVPHGESG TVIGVQVFND
DEDGDILPTG VNEMVRVYVA QKRKITDGDK LAGRHGNKGV IAKILPVEDM PFLEDGTPID
IILNPMGVPG RMNIGQVMET HLGWVAKAGW DLDPSDATAA DLPEPALHGE PGTPVAVPVF
DGLTADEVSG LIANHRPNRD GERMIKEDGK ARLFDGRSGE PFPDPVSVGY MYMLKLHHLV
DDKLHARSTG PYSMITQQPL GGKAQFGGQR FGEMEVWALE AYGAAYALQE LLTIKSDDIA
GRVKVYEAIV KGENIPEPGI PESFRVLLKE MQSLCLNVEV LSSDGTAHEV QESDEEVFRA
AEELGIDLSR RPHEGVGSIE EV
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