Gene Bfae_23050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_23050 
Symbol 
ID8400851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2584155 
End bp2584985 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content71% 
IMG OID644998357 
Productpredicted membrane protein, hemolysin III 
Protein accessionYP_003155688 
Protein GI257069433 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACG GACATCACCG GGACGCCCGC GCACAGGGCG CGTTCACCTC GGAGGAAGAG 
GTCGAGGCCG CGGAGGCGGT CGCGGAGAGC GGCGGCACCC GGCTGCCGTC CGACGACGAC
CTGCCCACCG CCGAGACGTT CCCCTTCGCC CCGCGCACCC TCACCCGGGC GATGGCGCGG
CGCGCCACGC AGCTGGGGCT GCAGCTGCCC AAGCCCCGGC TGCGCGGCAT GCTGCACCTG
ATCGCCTTCC CCACCACGCT GGTGATCGGG CTGCTGCTGG TCGCGGTGGG CGAGACCTTC
GCGACGCGAC TGGCCTGCGC GGTGTTCGTG CTGACCGCGG GGATGCTCTT CGGCATCAGC
GCCGTCTACC ACCGCGGCAC CTGGACCCCG CAGCGGGCGA TCATGCTGCG CCGCTTCGAC
CACGCGAACA TCTTCCTCAT CATCGCCGGC ACCTACACCC CGATCGCGGT GACCCTGCTG
GCGCCCCGCC AGGCGCTCAC GCTGCTGCTC ATCGCCTGGG GCGGCGCACT GGTGGGCGTG
TGCTTCCGGC TGTTCTGGAC CGCGGCCCCG CGCTGGATCT ATGTGCCCGC GTACATCGCT
CTGGGCTGGG TGGCGGTGTT CTACATGCCC GCGCTGCATG CCGGGGGCGG CTGGCCCGTG
GTGTGGCTGC TGGTGATCGG CGGCCTCGCC TACACCGCCG GTGCGGTGAT GTATGCGCTC
AAGCGCCCCA ATCCCTCACC GGCATGGTTC GGCTTCCACG AGATCTTCCA TGCGGGCACG
CTGATCGGCT TCGGCTGTCA CTTCGCCGCC GTGGCCGTCG CGGTGCTCTG A
 
Protein sequence
MDNGHHRDAR AQGAFTSEEE VEAAEAVAES GGTRLPSDDD LPTAETFPFA PRTLTRAMAR 
RATQLGLQLP KPRLRGMLHL IAFPTTLVIG LLLVAVGETF ATRLACAVFV LTAGMLFGIS
AVYHRGTWTP QRAIMLRRFD HANIFLIIAG TYTPIAVTLL APRQALTLLL IAWGGALVGV
CFRLFWTAAP RWIYVPAYIA LGWVAVFYMP ALHAGGGWPV VWLLVIGGLA YTAGAVMYAL
KRPNPSPAWF GFHEIFHAGT LIGFGCHFAA VAVAVL