| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_21870 |
|---|
| Symbol | |
|---|
| ID | 8400733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 2462585 |
|---|
| End bp | 2464600 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644998247 |
|---|
| Product | predicted membrane protein |
|---|
| Protein accession | YP_003155578 |
|---|
| Protein GI | 257069323 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3336] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCA CGTCCCGGCG CGCGGGCGCG CTCTTCATCC CCCTCCTGCT GCTCCTCACT
GTCGCCGCCG CCCTCGTCGG CATGGCCGCG ACCGGTGCCC TGGCCCCCGC CTCGCTGGTC
CCCGCCTCGC CGCTGGTGAC CTGGGGCCTG CCGGTCGTGC GGGCGCTGCA CCACCTCGGG
CTCGTGCTCG CCATCGGTGC CGGCGGGACC GCCGTGCTGC TGCTGCCCGG CCCCGGGCGG
CGCGAGGTGA CCCCCCTCGA CCCGCTGCGC CGCCGCACCG TGCGACTCGG CGCCGCCGGA
GCGCTGCTGT GGACGGTCGC CGCTCTCGCC CAGATCCCGC TGGGAGGTCT CGAGGCGACC
GGTGCCGGCG CCGGGCTGAA CGTCTGGGAC ATCGCGATGG GCGGCGCCCT GGGACGGCTG
CAGATGGGCG TGGTCGTCTT CGCCGCGGCC ACCACCCTCG CCTATGCCCT CGCCCGCTCC
ACCGTGCTGG CCTGCTGGGG GCTGGCCTTC GCCGGGATCG GCACCGGGGC GCTGGGCCTG
GCCGGTCACG CCGGTGCGAG CCTGGATCAC ATCAACGCGG TCAACGCCAT GGCCCTGCAC
CTCGTGGCGG TCTCCGTCTG GGCCGGCGGG CTGCTGCTCA TCGCTCTGCT CGCGCCCCGC
ATGGAGGATG CGACGCTCGC CGTCACGATC CGCCGCTTCT CGCCCTGGGC GCTCGCCTCG
GTCGTCTCCC TCGCGCTCAG CGGCCTCATC AGCGCCTGGA TCCGGCTGTC CGACTGGACG
GACCTGCTGA CCACCGGGTA CGGGCGGGTG GTGCTCGCCA AGACGATCGG GCTCACGGTG
CTGGCGGTGT TCGGGGCGCT GCAGCGCCGC CGCCTCGGCG ATCGCGTGCG CTTCCGCCAC
CTGGCCGCCA CCGAGGGTCT GCTGATGGCC GTGGTGATCG GGGCGTCGAT CGCCCTGGGC
CGCTCCGCCC CGCCGGTGCC GCAGGAGATC CCGGCCGTCG GCGATCTGCG GGTGCTGTCC
CTGGCCGGGT TCCTCCCGCC CAAGCGCGAG TTCAGCCCGC TGACGATGTT CACCGAGTTC
CAGCCGGACT GGATCGCGCT GGCCCTCGCG GTCGCCATGG CCGGCGCGTA CATCCTCGGA
GCCGTGCGCC TGGCGCGCCG CGGCGACGCC TGGCAGTGGC ACCGCACCGC GGCCTTCCTC
GCCGGCTGCC TCGCCTTCGC CTGGGTGATG AACGGCGGTG CGGCGGCCTG GGGCAAGTTC
CGCTTCGACG CGCACATGAT CCAGCACATG GCGATGATGA TGATCGTCCC GCCGCTGTGG
GCGCTCGGCG CCCCCGTGAC GCTGCTGTCC CGCGCGGTGA CACCGCGCAC GGACGGGTCC
CGGGGGATCC GCGAATGGGT GCTCGCAGCG CTGCACTCCG GCTATTCGCG CGTGCTGAGC
GCCCCGCCGG TGGCGGGCCT GATCTTCGCC GGCTCGCTGG TCATCTTCTA CTTCTCGCCG
CTGTTCGAGC TGGCGATGTA CCACCACCTC GGGCACACGC TGATGACGGT GCACTTCCTG
GCCTCGGGGT ACCTGTTCGC CTGGGTGCTG ATCGGCATCG ACCCCTCCAC CAGGCCGATC
AACCCCGTGC TGAAGCTGAT CACCCTGCTG GTGACCCTCG CGTTCCACGC CTTCTTCGGG
GTGGCGCTGG TCTCGGCCAC CTGGCTGGTG GCGGAGCACT GGTATCTCGA CCTGGGCATG
TACCCCACCG AGCGGCTCGA GCTGATCCAG ACCCGCGGCG GGACGATCAT GTGGGCGATC
TCGGAGGTGC CGACCCTCGG CTACGCGATC ATCGTCGCGG TGCTGTGGAT GCAGTCCGAC
GATCGCCGCG CCCGCCAGTA CGACCGCAAG GCGGAGCGGG ACGGCGGCGC CGAGCTCGCG
GCCTACAACG CCTACCTCGC GAGCCTGCGC GGCGAGAGCC CCGCCCCCGA AGCGCAGGAG
AGCGAGCCGC CGGAGGAGAC CGGCCCCCGC GACTGA
|
|---|
| Protein sequence | MITTSRRAGA LFIPLLLLLT VAAALVGMAA TGALAPASLV PASPLVTWGL PVVRALHHLG
LVLAIGAGGT AVLLLPGPGR REVTPLDPLR RRTVRLGAAG ALLWTVAALA QIPLGGLEAT
GAGAGLNVWD IAMGGALGRL QMGVVVFAAA TTLAYALARS TVLACWGLAF AGIGTGALGL
AGHAGASLDH INAVNAMALH LVAVSVWAGG LLLIALLAPR MEDATLAVTI RRFSPWALAS
VVSLALSGLI SAWIRLSDWT DLLTTGYGRV VLAKTIGLTV LAVFGALQRR RLGDRVRFRH
LAATEGLLMA VVIGASIALG RSAPPVPQEI PAVGDLRVLS LAGFLPPKRE FSPLTMFTEF
QPDWIALALA VAMAGAYILG AVRLARRGDA WQWHRTAAFL AGCLAFAWVM NGGAAAWGKF
RFDAHMIQHM AMMMIVPPLW ALGAPVTLLS RAVTPRTDGS RGIREWVLAA LHSGYSRVLS
APPVAGLIFA GSLVIFYFSP LFELAMYHHL GHTLMTVHFL ASGYLFAWVL IGIDPSTRPI
NPVLKLITLL VTLAFHAFFG VALVSATWLV AEHWYLDLGM YPTERLELIQ TRGGTIMWAI
SEVPTLGYAI IVAVLWMQSD DRRARQYDRK AERDGGAELA AYNAYLASLR GESPAPEAQE
SEPPEETGPR D
|
|---|
| |