Gene Bfae_20470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_20470 
Symbol 
ID8400593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2289218 
End bp2289955 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID644998107 
ProductABC-type antimicrobial peptide transport system, ATPase component 
Protein accessionYP_003155444 
Protein GI257069189 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0202995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCG CTCCTCTGGA TGCTCGCCCG TCACCCGCGG ACAGCACCGC CCCCGCCGTC 
GTCGCCCGCG GCGTCACCCG GACCTACGGC TCCGGCGCCG GTTCCGTCAC CGCCCTGGAT
GCGGTGGACC TCGACATCTC CCGCGGCGCC TTCACGGCGA TCATGGGTCC CTCCGGCTCC
GGCAAGTCCA CGCTGCTGCA CATCCTCGCC GGGCTCGACG TGGTCGACTC CGGTTCGATC
CTGCTGGACG GCACCGAGAT CACCGCCCTC GGCGACGATG CGCTCACCAA GCTGCGGCGG
GAGAAGATCG GCTTCGTCTT CCAGTCCTTC AACCTGCTGC CGATGCTGAC CGCCGAGCAG
AACATCCTGC TGCCGCTCGA GCTCGCCGGC ACGCGCGCGG ACCGGGCATG GCTGGAGACG
ATCGCCTCCG CCTTCGGCAT CACCGACCGG CTCTCGCACC TCCCCTCGCA GCTCTCCGGC
GGCCAGGTGC AGCGCGTCGC GATCTCCCGC GCCCTGGTCA CCTCCCCCGC GGTCGTCTTC
GCCGACGAGC CCACCGGCAA CCTCGACTCC CGCACCACCG AGGAGGTGCT CGACTTCCTG
CGGCTGAGCG TGGACGAGTT CCACCAGACC GTCGTGATGG TCACCCATGA GCGGGACGCC
GCCGAGCGCG CCGACCGCAT CATCACCCTC GCCGACGGCC GCGTCGCCTC CGACGAGGAC
CTGCGAGGGC AGCGCTGA
 
Protein sequence
MTTAPLDARP SPADSTAPAV VARGVTRTYG SGAGSVTALD AVDLDISRGA FTAIMGPSGS 
GKSTLLHILA GLDVVDSGSI LLDGTEITAL GDDALTKLRR EKIGFVFQSF NLLPMLTAEQ
NILLPLELAG TRADRAWLET IASAFGITDR LSHLPSQLSG GQVQRVAISR ALVTSPAVVF
ADEPTGNLDS RTTEEVLDFL RLSVDEFHQT VVMVTHERDA AERADRIITL ADGRVASDED
LRGQR