Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_19580 |
Symbol | |
ID | 8400504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 2199996 |
End bp | 2204801 |
Gene Length | 4806 bp |
Protein Length | 1601 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644998021 |
Product | ATP dependent helicase, Lhr family |
Protein accession | YP_003155362 |
Protein GI | 257069107 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.512724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGA CCCGCCAGGC GCTCCCGTCC TCCTTCTCCC CCGCCACGGC GCGGTGGTTC GAGGAATCGT TCGATGCGCC CACCCCCGCG CAGGCCGCGG CGTGGGAGGC CATCGACCGT GGGGACGACA CGCTCGTGGT CGCCCCCACC GGCTCGGGCA AGACCCTCGC CGCCTTCCTC ACCGCGATCG ATCGCCTGGC CTCTGGCCCG GCGCCAGCCG ACCGACCGTC AGGTCCGGGC CGCGCCGCGG CGGGGCCCGG ACGGGGCGGA GAGCGCGGAG GCGGCGCAGG GCGTGGACGC CGCAGCACGA GCGTCCTGTA CATCTCGCCG CTGAAGGCCC TCGGCGTCGA CGTCGAACGC AACCTGACCT CCCCTCTCGT GGGCACGGCC CGCACCGCCG AGAGCCTCGG CGAGGTGCGC CGTCCCCTGA GCGTGGGGGT GCGCACGGGG GACACCCCCG CCGCCGAGCG GCGACGGCTC GTGACCCATC CCCCGGACAT CCTCATCACC ACCCCCGAGT CGCTGTTCCT CATGCTCACC TCCCAGGCGC GGGAGACGCT GCGCGGGGTG GAGACGGTGA TCCTCGACGA GGTGCACGCC GTCGCGGGCG GCAAGCGGGG CGTGCACCTC GCGCTGTCCC TCGCCCGGCT CGACGCCCTG CTGGAGGCGC CGGCGCAGCG CATCGGTCTC TCCGCGACGG TGGAACCGGT GGAGGAGGTC GCCGCCTTCC TCACCGGCTC GGGACGCTCC CGCGAGGTGA CGGTGGTGCG GCCCGAGTCC ACCAAGCGCT GGGACATCAC GGTCACGCTG CCCGTGGCGG ACCTGCAGTC CATCGAACCT CCCGCCGATG CGGTCGACGA CGAGGACGTC ACCGGCACGG TCTGGCCGCA CGTCGAGCGG GCGGTGCTCG AGCGCGTCCT CGCGCATCGC TCCACCATCG TGTTCACCAA CTCCCGCAGC CAGGCCGAGC GCCTCACCGG CAAGCTGAAC CGTCTGCACG CCCGTCGGGT CGCGGTCGAC GCGGCCGCCG GGGCGCCGTC GGCGGACTCT GCGCGCGCCG GCGCGTCCTC CTCGGGCTCC GCGGGCGCGG GAGGCGCGGG AGAGGAGGAC GGCACCGAGG GCGAGGACAT CGCCCGCGCC CACCACGGCT CGATGTCCAA GGAGGTGCGC GCCGGGATCG AGGAGCAGCT GAAATCCGGC GCGCTGCGCT GCGTGGTGGC GACCTCCTCC CTCGAGCTGG GCATCGACAT GGGCGCCGTG GACCTGGTGC TGCAGGTGGC CGCGCCGATG TCTGTCTCGA GCCTGCTGCA GCGGGTGGGG CGTGCCGGGC ACGACGTCGG CGCCGTCTCC ACCGGCTCGC TGCATCCGCT GCACGCCGCG GACGTGCTGC GCTCCGCCGT CGCGGTGCAG GAGGCGGTCG CGGGGAGGAT CGAACCGCTC GCGGTGCCGC GCAACGCCCT GGACGTGCTC GCCCAGCACA CCGTCTCGGC CGCGGCGATG GACGACCTGC AGGTCGATGA GTGGTTCGAC CTGGTCCGCA CCGCACATCC CTACCGCGCG CTGCCCCGCT CCGCCTTCGA CCAGACGATC GATCTGCTCG CCGGTCGGTA TCCCTCGACC GATTTCTCCG AGCTGCGGCC CCGCCTGGTC CACGACCACG ACACGGGGAT CCTCACGGCC CGCCCGGGCG CTCAGCGCCT CGCGGTCACC AGCGGCGGCA CGATCCCGGA TCGGGGCCTG TACCCGGTGC ACCTGGTGGC CGGGGACGAC GACTCCCAGC CGCGCCGGGT CGGGGAGCTC GACGAGGAGA TGGTCTACGA GTCGCGGCGC GGGGACGTGA TCACGCTGGG CACCACCAGC TGGAGGATCG AGGAGATCAC CGCCTCCCGG GTGACCGTCT CCCCCGCCTT CGGCCTCTCC GGCCGCATCC CCTTCTGGCA CGGCGACGGG GACGGTCGCC CCGCGAGCCT CGGCCGTGCG ATCGCCTCGG CGCAGTCCGA GCTCGCGAGC CTCCCGCGCC CCGAGGCCGA GGACCGGCTC GGCACGCTGG GACTGGACTC CGATGCGCGC ACGGTGCTGC TGGACCACCT GGCCGAGCAG CAGCACGCGA CCGGCACCGT CCCGGGGCCG CAGCAGCTGG TGGTCGAGCG ATTCCTCGAC GAGCTCGGCG ACTGGCGGGT GGTGCTGCAC TGCGCGCTCG GGCAGCGGAT CACCGGGCCC TGGGCGCTCG CGGTCGGGGC CCGGGTCCAG GAGCGGTACG GGCTGGACGG CCAGGCGATG GCCGCCGACG ACGGGATCGT GCTGCGCATC CCCCACGGCG AGCAGCCACC GGGGGCGGAT CTGTTCGTGT TCACCCCCGA GGAGATCGAG CAGGAGGTGC GCCGGCTCGT CGGCTCCTCC GCCCTGTTCG CCGCCCGCTT CCGCGAGTGC GCGGCGCGCG CCCTGCTGCT GCCGAGGCGG GACCCGACGC AGCGCTCCCC GCTGTGGCAG CAGCGCCAGC GCTCCTCCCA CCTGCTCGAG GTGGCCCGCC CGCACCCGGA CTTCCCGATC ATGCTGGAAG CCGCCCGGGA GTGCCTGCAG GACGTCTACG ACCTGCCCGC CCTGGTGGAG CTGATGGAGC AGATCGGGCG TCGGCGCCTC GAGGTGCGGG AGGTGGAGAC CCCGGCGCCC TCCCCTTTCG CCCGCTCGCT GCTGTTCGGG TATCTCGCGC AGTTCATCTA CGACGGCGAC GCCCCGCTGG CCGAACGCCG CACCGCCGCG CTCGCCCTGG ACCAGTCGCT GCTGGCCGAG CTCCTGGGCT CGGTGAGCCT GCGCGAGCTG CTGGACGCCG AGGTGATCGC CGAGGTCGAG CAGCAGCTGC AGGGGCTCAC CGCACAGCGG GCGCTGCGCG GCGGCGAACA GATCGCCGAT GCGCTGCGCC GGCTCGGCCC GCTCACCGCG GACGATCTCT CACGCCGCAC GGCAGAGGGG GTGGACCTCG AGGCGGAGCT CGAACAGCTG ACCCGGGCAC GCCGGATCAT CAGCGTGCGC CTCGCCGGGC GGGAGCACGT CGCGGCGGTC GAGGACGCCG GCCTGCTGCG CGATGCGCTC GGGACGGCGC TGCCGCCCGG CCTTCCCCAG GCGCACCTGG CACCGGTGGA CCGGGCGGTC CCCCAGCTGC TGGCCCGCTG GGCGCGGGGC CGGGGACCGT TCCCGGCCGC CGACGCGGTG GAGGCCTTCG GCCTGGCCCC CGGCGTCGCC CGCGGCACGC TCGAGCAGCT CACCGCAGAA CGGGTGCTCC AGCAGGGCGA GTTCACCCCG GGTCGGGACG GCGAGGAATG GGTCGAGGCG GAGGTGCTGC GGCGCATCCG GCGGGCGAGC CTGGCCGCCT CGCGGCGCGA GATCGCGCCG GTGCCGGGCC CGGTGTATGC GCGGTTCCTC GGGCAGTGGC AGCACCTGGC CGGTCGCCGC GCGGACGGCC GACGCGACCG CCCCACCTGG CGGGACCGGG ACGGTCTGCT GTCGGTGGTC GATCAGCTCA CGGGCGTGTC TCTGCCGCTG TCGGCCTGGG AATCCCAGGT GCTGCCCGCC CGGCTGCCGG ACGTGACCCC GGCGCTGCTG GATGCGGCCT TCGCCTCCGG TGAGCTGGTG TGGACCGGGC ATGGCCGGCT CGGCGCGGAG GACGGCTGGA TCCGGCTCCA CCTCGCGGAG GCGCTGCCGC TCGGCCTCGA TGCCTCCGCG CTCGAGGAGG CGGCGGCCTC GCTCACCGAG GGCTCCACGG CCGCGCGGCT GCTCGCCCTG CTGCGCGGCA CCCCCGGCGC GCTGCGACAC GGGCAGATCC TCACCGCGCT GGCGGACGAG GGCGAAGCCC TCGCACCGCC GGCCGTGCAC GAGGCCCTGT GGGACCTCGC CTTCTCGGGC CTGATCACCA ATGATTCCTT CGAGGCGCTG CGCAGCTACT CACGCGGCCC GGCATCGAGC CGCGGCTCCC GCGCGGCGGG ACGCTCGCGG CCCCTGACGC GTCGGGGCGC GGCCCGGCTC TCGGCGGCGA TGATGCGCCA GGGCGCGGCC AGCGTCTCCG AGCTGGCGGA GGGGCCGGTC GGTGCCGGTC GCTGGTCCGC GGTGCGGGTG GAGCCGGTGG ATCCGGCCGC CCGCGCGGCG GCCCTCGCGA CACTGCTGCT GGACCGGCAC GGCGTGGTCA CCCGCGGCGC GATGGACGTC GAGGACATCC CCGGCGGTTT CGCCGCGGTG TACCGGGTGC TCGCCATGCT CGAGGAGAAC GGCAGCTGCC GGCGCGGCTA TTTCGTCGAC GGGCTCGGCG CCTCGCAGTT CGCCCCGGTC GAGGCGGTCG ATCGCCTGCG CGATCGGTGC CATGACGCGG AGGCCGCTCC CGGCCCGGCG GAGAGCCCCG GCGGGGGCGG TGCGGACGCG ACCACCGTGG CCCTGGCCGT CACCGACCCC GCGAACCCCT ATGGCGCGGC GCTACCCTGG CCGGAGCTGA CGATCCCGCC GCCGGAAGGC GCGACGGTGC GTCCCGCGCG GCGCGCCGGT GCGCTCGTGC TGCTGCGGGA CGGGCATGTG CGCGCGGTCG TGGACAAGGG GGCCAAGCAC CTGCTGTGGT GGGCCGAGGA GAGCGCGAGG GACGAGGTCG CCGCGCAGCT CGTGCGGGCG ATCGCCGAGG AGTCGCGCCT GCCGCAGCTG CGGATCGAGC GGATCAACGG CCACGGCATC GACAGCGCAC CGGTGGCCGA GATCGCCCGG GCGCTCGTGG ACGCCGGCTG CTATCGCTCC CCGCGGTCGC TCCGCCTGCG CGCCGGGGAT CGCTGA
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Protein sequence | MAMTRQALPS SFSPATARWF EESFDAPTPA QAAAWEAIDR GDDTLVVAPT GSGKTLAAFL TAIDRLASGP APADRPSGPG RAAAGPGRGG ERGGGAGRGR RSTSVLYISP LKALGVDVER NLTSPLVGTA RTAESLGEVR RPLSVGVRTG DTPAAERRRL VTHPPDILIT TPESLFLMLT SQARETLRGV ETVILDEVHA VAGGKRGVHL ALSLARLDAL LEAPAQRIGL SATVEPVEEV AAFLTGSGRS REVTVVRPES TKRWDITVTL PVADLQSIEP PADAVDDEDV TGTVWPHVER AVLERVLAHR STIVFTNSRS QAERLTGKLN RLHARRVAVD AAAGAPSADS ARAGASSSGS AGAGGAGEED GTEGEDIARA HHGSMSKEVR AGIEEQLKSG ALRCVVATSS LELGIDMGAV DLVLQVAAPM SVSSLLQRVG RAGHDVGAVS TGSLHPLHAA DVLRSAVAVQ EAVAGRIEPL AVPRNALDVL AQHTVSAAAM DDLQVDEWFD LVRTAHPYRA LPRSAFDQTI DLLAGRYPST DFSELRPRLV HDHDTGILTA RPGAQRLAVT SGGTIPDRGL YPVHLVAGDD DSQPRRVGEL DEEMVYESRR GDVITLGTTS WRIEEITASR VTVSPAFGLS GRIPFWHGDG DGRPASLGRA IASAQSELAS LPRPEAEDRL GTLGLDSDAR TVLLDHLAEQ QHATGTVPGP QQLVVERFLD ELGDWRVVLH CALGQRITGP WALAVGARVQ ERYGLDGQAM AADDGIVLRI PHGEQPPGAD LFVFTPEEIE QEVRRLVGSS ALFAARFREC AARALLLPRR DPTQRSPLWQ QRQRSSHLLE VARPHPDFPI MLEAARECLQ DVYDLPALVE LMEQIGRRRL EVREVETPAP SPFARSLLFG YLAQFIYDGD APLAERRTAA LALDQSLLAE LLGSVSLREL LDAEVIAEVE QQLQGLTAQR ALRGGEQIAD ALRRLGPLTA DDLSRRTAEG VDLEAELEQL TRARRIISVR LAGREHVAAV EDAGLLRDAL GTALPPGLPQ AHLAPVDRAV PQLLARWARG RGPFPAADAV EAFGLAPGVA RGTLEQLTAE RVLQQGEFTP GRDGEEWVEA EVLRRIRRAS LAASRREIAP VPGPVYARFL GQWQHLAGRR ADGRRDRPTW RDRDGLLSVV DQLTGVSLPL SAWESQVLPA RLPDVTPALL DAAFASGELV WTGHGRLGAE DGWIRLHLAE ALPLGLDASA LEEAAASLTE GSTAARLLAL LRGTPGALRH GQILTALADE GEALAPPAVH EALWDLAFSG LITNDSFEAL RSYSRGPASS RGSRAAGRSR PLTRRGAARL SAAMMRQGAA SVSELAEGPV GAGRWSAVRV EPVDPAARAA ALATLLLDRH GVVTRGAMDV EDIPGGFAAV YRVLAMLEEN GSCRRGYFVD GLGASQFAPV EAVDRLRDRC HDAEAAPGPA ESPGGGGADA TTVALAVTDP ANPYGAALPW PELTIPPPEG ATVRPARRAG ALVLLRDGHV RAVVDKGAKH LLWWAEESAR DEVAAQLVRA IAEESRLPQL RIERINGHGI DSAPVAEIAR ALVDAGCYRS PRSLRLRAGD R
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