Gene Bfae_19580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_19580 
Symbol 
ID8400504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2199996 
End bp2204801 
Gene Length4806 bp 
Protein Length1601 aa 
Translation table11 
GC content75% 
IMG OID644998021 
ProductATP dependent helicase, Lhr family 
Protein accessionYP_003155362 
Protein GI257069107 
COG category[R] General function prediction only 
COG ID[COG1201] Lhr-like helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.512724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGA CCCGCCAGGC GCTCCCGTCC TCCTTCTCCC CCGCCACGGC GCGGTGGTTC 
GAGGAATCGT TCGATGCGCC CACCCCCGCG CAGGCCGCGG CGTGGGAGGC CATCGACCGT
GGGGACGACA CGCTCGTGGT CGCCCCCACC GGCTCGGGCA AGACCCTCGC CGCCTTCCTC
ACCGCGATCG ATCGCCTGGC CTCTGGCCCG GCGCCAGCCG ACCGACCGTC AGGTCCGGGC
CGCGCCGCGG CGGGGCCCGG ACGGGGCGGA GAGCGCGGAG GCGGCGCAGG GCGTGGACGC
CGCAGCACGA GCGTCCTGTA CATCTCGCCG CTGAAGGCCC TCGGCGTCGA CGTCGAACGC
AACCTGACCT CCCCTCTCGT GGGCACGGCC CGCACCGCCG AGAGCCTCGG CGAGGTGCGC
CGTCCCCTGA GCGTGGGGGT GCGCACGGGG GACACCCCCG CCGCCGAGCG GCGACGGCTC
GTGACCCATC CCCCGGACAT CCTCATCACC ACCCCCGAGT CGCTGTTCCT CATGCTCACC
TCCCAGGCGC GGGAGACGCT GCGCGGGGTG GAGACGGTGA TCCTCGACGA GGTGCACGCC
GTCGCGGGCG GCAAGCGGGG CGTGCACCTC GCGCTGTCCC TCGCCCGGCT CGACGCCCTG
CTGGAGGCGC CGGCGCAGCG CATCGGTCTC TCCGCGACGG TGGAACCGGT GGAGGAGGTC
GCCGCCTTCC TCACCGGCTC GGGACGCTCC CGCGAGGTGA CGGTGGTGCG GCCCGAGTCC
ACCAAGCGCT GGGACATCAC GGTCACGCTG CCCGTGGCGG ACCTGCAGTC CATCGAACCT
CCCGCCGATG CGGTCGACGA CGAGGACGTC ACCGGCACGG TCTGGCCGCA CGTCGAGCGG
GCGGTGCTCG AGCGCGTCCT CGCGCATCGC TCCACCATCG TGTTCACCAA CTCCCGCAGC
CAGGCCGAGC GCCTCACCGG CAAGCTGAAC CGTCTGCACG CCCGTCGGGT CGCGGTCGAC
GCGGCCGCCG GGGCGCCGTC GGCGGACTCT GCGCGCGCCG GCGCGTCCTC CTCGGGCTCC
GCGGGCGCGG GAGGCGCGGG AGAGGAGGAC GGCACCGAGG GCGAGGACAT CGCCCGCGCC
CACCACGGCT CGATGTCCAA GGAGGTGCGC GCCGGGATCG AGGAGCAGCT GAAATCCGGC
GCGCTGCGCT GCGTGGTGGC GACCTCCTCC CTCGAGCTGG GCATCGACAT GGGCGCCGTG
GACCTGGTGC TGCAGGTGGC CGCGCCGATG TCTGTCTCGA GCCTGCTGCA GCGGGTGGGG
CGTGCCGGGC ACGACGTCGG CGCCGTCTCC ACCGGCTCGC TGCATCCGCT GCACGCCGCG
GACGTGCTGC GCTCCGCCGT CGCGGTGCAG GAGGCGGTCG CGGGGAGGAT CGAACCGCTC
GCGGTGCCGC GCAACGCCCT GGACGTGCTC GCCCAGCACA CCGTCTCGGC CGCGGCGATG
GACGACCTGC AGGTCGATGA GTGGTTCGAC CTGGTCCGCA CCGCACATCC CTACCGCGCG
CTGCCCCGCT CCGCCTTCGA CCAGACGATC GATCTGCTCG CCGGTCGGTA TCCCTCGACC
GATTTCTCCG AGCTGCGGCC CCGCCTGGTC CACGACCACG ACACGGGGAT CCTCACGGCC
CGCCCGGGCG CTCAGCGCCT CGCGGTCACC AGCGGCGGCA CGATCCCGGA TCGGGGCCTG
TACCCGGTGC ACCTGGTGGC CGGGGACGAC GACTCCCAGC CGCGCCGGGT CGGGGAGCTC
GACGAGGAGA TGGTCTACGA GTCGCGGCGC GGGGACGTGA TCACGCTGGG CACCACCAGC
TGGAGGATCG AGGAGATCAC CGCCTCCCGG GTGACCGTCT CCCCCGCCTT CGGCCTCTCC
GGCCGCATCC CCTTCTGGCA CGGCGACGGG GACGGTCGCC CCGCGAGCCT CGGCCGTGCG
ATCGCCTCGG CGCAGTCCGA GCTCGCGAGC CTCCCGCGCC CCGAGGCCGA GGACCGGCTC
GGCACGCTGG GACTGGACTC CGATGCGCGC ACGGTGCTGC TGGACCACCT GGCCGAGCAG
CAGCACGCGA CCGGCACCGT CCCGGGGCCG CAGCAGCTGG TGGTCGAGCG ATTCCTCGAC
GAGCTCGGCG ACTGGCGGGT GGTGCTGCAC TGCGCGCTCG GGCAGCGGAT CACCGGGCCC
TGGGCGCTCG CGGTCGGGGC CCGGGTCCAG GAGCGGTACG GGCTGGACGG CCAGGCGATG
GCCGCCGACG ACGGGATCGT GCTGCGCATC CCCCACGGCG AGCAGCCACC GGGGGCGGAT
CTGTTCGTGT TCACCCCCGA GGAGATCGAG CAGGAGGTGC GCCGGCTCGT CGGCTCCTCC
GCCCTGTTCG CCGCCCGCTT CCGCGAGTGC GCGGCGCGCG CCCTGCTGCT GCCGAGGCGG
GACCCGACGC AGCGCTCCCC GCTGTGGCAG CAGCGCCAGC GCTCCTCCCA CCTGCTCGAG
GTGGCCCGCC CGCACCCGGA CTTCCCGATC ATGCTGGAAG CCGCCCGGGA GTGCCTGCAG
GACGTCTACG ACCTGCCCGC CCTGGTGGAG CTGATGGAGC AGATCGGGCG TCGGCGCCTC
GAGGTGCGGG AGGTGGAGAC CCCGGCGCCC TCCCCTTTCG CCCGCTCGCT GCTGTTCGGG
TATCTCGCGC AGTTCATCTA CGACGGCGAC GCCCCGCTGG CCGAACGCCG CACCGCCGCG
CTCGCCCTGG ACCAGTCGCT GCTGGCCGAG CTCCTGGGCT CGGTGAGCCT GCGCGAGCTG
CTGGACGCCG AGGTGATCGC CGAGGTCGAG CAGCAGCTGC AGGGGCTCAC CGCACAGCGG
GCGCTGCGCG GCGGCGAACA GATCGCCGAT GCGCTGCGCC GGCTCGGCCC GCTCACCGCG
GACGATCTCT CACGCCGCAC GGCAGAGGGG GTGGACCTCG AGGCGGAGCT CGAACAGCTG
ACCCGGGCAC GCCGGATCAT CAGCGTGCGC CTCGCCGGGC GGGAGCACGT CGCGGCGGTC
GAGGACGCCG GCCTGCTGCG CGATGCGCTC GGGACGGCGC TGCCGCCCGG CCTTCCCCAG
GCGCACCTGG CACCGGTGGA CCGGGCGGTC CCCCAGCTGC TGGCCCGCTG GGCGCGGGGC
CGGGGACCGT TCCCGGCCGC CGACGCGGTG GAGGCCTTCG GCCTGGCCCC CGGCGTCGCC
CGCGGCACGC TCGAGCAGCT CACCGCAGAA CGGGTGCTCC AGCAGGGCGA GTTCACCCCG
GGTCGGGACG GCGAGGAATG GGTCGAGGCG GAGGTGCTGC GGCGCATCCG GCGGGCGAGC
CTGGCCGCCT CGCGGCGCGA GATCGCGCCG GTGCCGGGCC CGGTGTATGC GCGGTTCCTC
GGGCAGTGGC AGCACCTGGC CGGTCGCCGC GCGGACGGCC GACGCGACCG CCCCACCTGG
CGGGACCGGG ACGGTCTGCT GTCGGTGGTC GATCAGCTCA CGGGCGTGTC TCTGCCGCTG
TCGGCCTGGG AATCCCAGGT GCTGCCCGCC CGGCTGCCGG ACGTGACCCC GGCGCTGCTG
GATGCGGCCT TCGCCTCCGG TGAGCTGGTG TGGACCGGGC ATGGCCGGCT CGGCGCGGAG
GACGGCTGGA TCCGGCTCCA CCTCGCGGAG GCGCTGCCGC TCGGCCTCGA TGCCTCCGCG
CTCGAGGAGG CGGCGGCCTC GCTCACCGAG GGCTCCACGG CCGCGCGGCT GCTCGCCCTG
CTGCGCGGCA CCCCCGGCGC GCTGCGACAC GGGCAGATCC TCACCGCGCT GGCGGACGAG
GGCGAAGCCC TCGCACCGCC GGCCGTGCAC GAGGCCCTGT GGGACCTCGC CTTCTCGGGC
CTGATCACCA ATGATTCCTT CGAGGCGCTG CGCAGCTACT CACGCGGCCC GGCATCGAGC
CGCGGCTCCC GCGCGGCGGG ACGCTCGCGG CCCCTGACGC GTCGGGGCGC GGCCCGGCTC
TCGGCGGCGA TGATGCGCCA GGGCGCGGCC AGCGTCTCCG AGCTGGCGGA GGGGCCGGTC
GGTGCCGGTC GCTGGTCCGC GGTGCGGGTG GAGCCGGTGG ATCCGGCCGC CCGCGCGGCG
GCCCTCGCGA CACTGCTGCT GGACCGGCAC GGCGTGGTCA CCCGCGGCGC GATGGACGTC
GAGGACATCC CCGGCGGTTT CGCCGCGGTG TACCGGGTGC TCGCCATGCT CGAGGAGAAC
GGCAGCTGCC GGCGCGGCTA TTTCGTCGAC GGGCTCGGCG CCTCGCAGTT CGCCCCGGTC
GAGGCGGTCG ATCGCCTGCG CGATCGGTGC CATGACGCGG AGGCCGCTCC CGGCCCGGCG
GAGAGCCCCG GCGGGGGCGG TGCGGACGCG ACCACCGTGG CCCTGGCCGT CACCGACCCC
GCGAACCCCT ATGGCGCGGC GCTACCCTGG CCGGAGCTGA CGATCCCGCC GCCGGAAGGC
GCGACGGTGC GTCCCGCGCG GCGCGCCGGT GCGCTCGTGC TGCTGCGGGA CGGGCATGTG
CGCGCGGTCG TGGACAAGGG GGCCAAGCAC CTGCTGTGGT GGGCCGAGGA GAGCGCGAGG
GACGAGGTCG CCGCGCAGCT CGTGCGGGCG ATCGCCGAGG AGTCGCGCCT GCCGCAGCTG
CGGATCGAGC GGATCAACGG CCACGGCATC GACAGCGCAC CGGTGGCCGA GATCGCCCGG
GCGCTCGTGG ACGCCGGCTG CTATCGCTCC CCGCGGTCGC TCCGCCTGCG CGCCGGGGAT
CGCTGA
 
Protein sequence
MAMTRQALPS SFSPATARWF EESFDAPTPA QAAAWEAIDR GDDTLVVAPT GSGKTLAAFL 
TAIDRLASGP APADRPSGPG RAAAGPGRGG ERGGGAGRGR RSTSVLYISP LKALGVDVER
NLTSPLVGTA RTAESLGEVR RPLSVGVRTG DTPAAERRRL VTHPPDILIT TPESLFLMLT
SQARETLRGV ETVILDEVHA VAGGKRGVHL ALSLARLDAL LEAPAQRIGL SATVEPVEEV
AAFLTGSGRS REVTVVRPES TKRWDITVTL PVADLQSIEP PADAVDDEDV TGTVWPHVER
AVLERVLAHR STIVFTNSRS QAERLTGKLN RLHARRVAVD AAAGAPSADS ARAGASSSGS
AGAGGAGEED GTEGEDIARA HHGSMSKEVR AGIEEQLKSG ALRCVVATSS LELGIDMGAV
DLVLQVAAPM SVSSLLQRVG RAGHDVGAVS TGSLHPLHAA DVLRSAVAVQ EAVAGRIEPL
AVPRNALDVL AQHTVSAAAM DDLQVDEWFD LVRTAHPYRA LPRSAFDQTI DLLAGRYPST
DFSELRPRLV HDHDTGILTA RPGAQRLAVT SGGTIPDRGL YPVHLVAGDD DSQPRRVGEL
DEEMVYESRR GDVITLGTTS WRIEEITASR VTVSPAFGLS GRIPFWHGDG DGRPASLGRA
IASAQSELAS LPRPEAEDRL GTLGLDSDAR TVLLDHLAEQ QHATGTVPGP QQLVVERFLD
ELGDWRVVLH CALGQRITGP WALAVGARVQ ERYGLDGQAM AADDGIVLRI PHGEQPPGAD
LFVFTPEEIE QEVRRLVGSS ALFAARFREC AARALLLPRR DPTQRSPLWQ QRQRSSHLLE
VARPHPDFPI MLEAARECLQ DVYDLPALVE LMEQIGRRRL EVREVETPAP SPFARSLLFG
YLAQFIYDGD APLAERRTAA LALDQSLLAE LLGSVSLREL LDAEVIAEVE QQLQGLTAQR
ALRGGEQIAD ALRRLGPLTA DDLSRRTAEG VDLEAELEQL TRARRIISVR LAGREHVAAV
EDAGLLRDAL GTALPPGLPQ AHLAPVDRAV PQLLARWARG RGPFPAADAV EAFGLAPGVA
RGTLEQLTAE RVLQQGEFTP GRDGEEWVEA EVLRRIRRAS LAASRREIAP VPGPVYARFL
GQWQHLAGRR ADGRRDRPTW RDRDGLLSVV DQLTGVSLPL SAWESQVLPA RLPDVTPALL
DAAFASGELV WTGHGRLGAE DGWIRLHLAE ALPLGLDASA LEEAAASLTE GSTAARLLAL
LRGTPGALRH GQILTALADE GEALAPPAVH EALWDLAFSG LITNDSFEAL RSYSRGPASS
RGSRAAGRSR PLTRRGAARL SAAMMRQGAA SVSELAEGPV GAGRWSAVRV EPVDPAARAA
ALATLLLDRH GVVTRGAMDV EDIPGGFAAV YRVLAMLEEN GSCRRGYFVD GLGASQFAPV
EAVDRLRDRC HDAEAAPGPA ESPGGGGADA TTVALAVTDP ANPYGAALPW PELTIPPPEG
ATVRPARRAG ALVLLRDGHV RAVVDKGAKH LLWWAEESAR DEVAAQLVRA IAEESRLPQL
RIERINGHGI DSAPVAEIAR ALVDAGCYRS PRSLRLRAGD R