Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_19350 |
Symbol | |
ID | 8400481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 2172506 |
End bp | 2173918 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644997998 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003155341 |
Protein GI | 257069086 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.28871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCCC ATGAGGCCGG AGCCCTTCAC GGCAACGATG CAGCCCCCAC CTGGCTGCCG TACCCCGCCG ACGTCAACAC CCTCATCGAC GGCCTGTGGT CCCGCACCAC CGCCCGCAAC GCCGAGGGCG CCGTCGAGGT GGGCGGTGTG GACGTGCGCC GCATCGCGGA GGAGGTCGGC ACCCCGGCCT TCGTGCTCGA CGAGGACGAC TTCCGCCACC GCGCCCGCGC CTTCCGCGAC GCCTTCGCCG AGGCGTTCCG CCCCCACCGC GGCGCCGACG TCTACTACGC GGGCAAGGCC TTCCTGTGCG GTGCCGTCGC CCGCTGGGTC GAGGAGGACG GGCTGGGCCT GGACGTGTGC ACGGGCGGCG AGCTCGCCGT GGCGCTGCGC GCCGGGTTCC CCGCCTCCCG CATCGCCCTG CACGGGAACA ACAAGTCCGC CTCGGAGATC CGCCGCGCCC TCGAGGCGGG GGTGGGCCGC ATCGTCATCG ACTCGCTCGA CGAGATCGAC CAGGTCGACG AGATCGCCGC CCGGCTGGGC CTGCGCGCCG GGGTCATGCT GCGGGTGACC ACGGGCGTCG AGGCGCACAC GCACGAGTTC ATCGCCACCG CGCACGAGGA CCAGAAGTTC GGCCTCTCCC TCACCGGCGG CTCCGCCTTC GAGGCGGTGC ACCGCGTGCT CGATGCCCCG CAGCTGGATC TGCTCGGCCT CCACTCGCAC ATCGGTTCCC AGATCTTCGA CACCGGCGGC TTCGAGGTCG CGGCCCGCCG CGTCCTCCAG CTGGTCGCCC GGGTGCGCGA CGAGCTCGGC CACACCATCG ACCAGCTCGA CCTGGGCGGC GGCTTCGGCG TCATGTACAA CACCCAGCAC ACCCCCTCCA CGCCGGAGGC GCTCGCCGCC GGGATCGCCG GGATCGTCGA GAAGCAGTGC CACGAGCTCG AGCTCGACGT GCCGCATCTG GCCTTCGAGC CGGGCCGGGC GATCGCCGGC CCCTCGACGC AGACCCTCTA CTCCGTGGGC ACCGTGAAGG ACGTCCGCCT CGGCGGCCCC CATCACCGCG TCTACGTCTC CGTGGACGGC GGGATGAGCG ACAACGTGCG CACCGCGCTC TACGACGCGG ACTACTCCTG CCTGCTCACC GGGCGGGTCT CCGAGGCCGC GCCCGAGGTG GTGCGCGTGG TCGGCAAGCA CTGCGAGAGC GGCGACATCG TCGTCAAGGA CGAATACCTC CCCGCCGACG TGCGGCGCGG CGACCTGATC TCCGTCCCGG TCACCGGCGC CTACTGCTAC TCCCTCGCCT CGAACTACAA CCACGTCCCG CGCCCGCCTG TCATCGCGGT GCGCGACGGC GAGATCCGCA CCCTGATCCG TCGCGAGACC GAGGAGGATC TGCTCGGCCT CGACGTCGGC TGA
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Protein sequence | MRAHEAGALH GNDAAPTWLP YPADVNTLID GLWSRTTARN AEGAVEVGGV DVRRIAEEVG TPAFVLDEDD FRHRARAFRD AFAEAFRPHR GADVYYAGKA FLCGAVARWV EEDGLGLDVC TGGELAVALR AGFPASRIAL HGNNKSASEI RRALEAGVGR IVIDSLDEID QVDEIAARLG LRAGVMLRVT TGVEAHTHEF IATAHEDQKF GLSLTGGSAF EAVHRVLDAP QLDLLGLHSH IGSQIFDTGG FEVAARRVLQ LVARVRDELG HTIDQLDLGG GFGVMYNTQH TPSTPEALAA GIAGIVEKQC HELELDVPHL AFEPGRAIAG PSTQTLYSVG TVKDVRLGGP HHRVYVSVDG GMSDNVRTAL YDADYSCLLT GRVSEAAPEV VRVVGKHCES GDIVVKDEYL PADVRRGDLI SVPVTGAYCY SLASNYNHVP RPPVIAVRDG EIRTLIRRET EEDLLGLDVG
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