Gene Bfae_19350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_19350 
Symbol 
ID8400481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2172506 
End bp2173918 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content72% 
IMG OID644997998 
Productdiaminopimelate decarboxylase 
Protein accessionYP_003155341 
Protein GI257069086 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.28871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCCC ATGAGGCCGG AGCCCTTCAC GGCAACGATG CAGCCCCCAC CTGGCTGCCG 
TACCCCGCCG ACGTCAACAC CCTCATCGAC GGCCTGTGGT CCCGCACCAC CGCCCGCAAC
GCCGAGGGCG CCGTCGAGGT GGGCGGTGTG GACGTGCGCC GCATCGCGGA GGAGGTCGGC
ACCCCGGCCT TCGTGCTCGA CGAGGACGAC TTCCGCCACC GCGCCCGCGC CTTCCGCGAC
GCCTTCGCCG AGGCGTTCCG CCCCCACCGC GGCGCCGACG TCTACTACGC GGGCAAGGCC
TTCCTGTGCG GTGCCGTCGC CCGCTGGGTC GAGGAGGACG GGCTGGGCCT GGACGTGTGC
ACGGGCGGCG AGCTCGCCGT GGCGCTGCGC GCCGGGTTCC CCGCCTCCCG CATCGCCCTG
CACGGGAACA ACAAGTCCGC CTCGGAGATC CGCCGCGCCC TCGAGGCGGG GGTGGGCCGC
ATCGTCATCG ACTCGCTCGA CGAGATCGAC CAGGTCGACG AGATCGCCGC CCGGCTGGGC
CTGCGCGCCG GGGTCATGCT GCGGGTGACC ACGGGCGTCG AGGCGCACAC GCACGAGTTC
ATCGCCACCG CGCACGAGGA CCAGAAGTTC GGCCTCTCCC TCACCGGCGG CTCCGCCTTC
GAGGCGGTGC ACCGCGTGCT CGATGCCCCG CAGCTGGATC TGCTCGGCCT CCACTCGCAC
ATCGGTTCCC AGATCTTCGA CACCGGCGGC TTCGAGGTCG CGGCCCGCCG CGTCCTCCAG
CTGGTCGCCC GGGTGCGCGA CGAGCTCGGC CACACCATCG ACCAGCTCGA CCTGGGCGGC
GGCTTCGGCG TCATGTACAA CACCCAGCAC ACCCCCTCCA CGCCGGAGGC GCTCGCCGCC
GGGATCGCCG GGATCGTCGA GAAGCAGTGC CACGAGCTCG AGCTCGACGT GCCGCATCTG
GCCTTCGAGC CGGGCCGGGC GATCGCCGGC CCCTCGACGC AGACCCTCTA CTCCGTGGGC
ACCGTGAAGG ACGTCCGCCT CGGCGGCCCC CATCACCGCG TCTACGTCTC CGTGGACGGC
GGGATGAGCG ACAACGTGCG CACCGCGCTC TACGACGCGG ACTACTCCTG CCTGCTCACC
GGGCGGGTCT CCGAGGCCGC GCCCGAGGTG GTGCGCGTGG TCGGCAAGCA CTGCGAGAGC
GGCGACATCG TCGTCAAGGA CGAATACCTC CCCGCCGACG TGCGGCGCGG CGACCTGATC
TCCGTCCCGG TCACCGGCGC CTACTGCTAC TCCCTCGCCT CGAACTACAA CCACGTCCCG
CGCCCGCCTG TCATCGCGGT GCGCGACGGC GAGATCCGCA CCCTGATCCG TCGCGAGACC
GAGGAGGATC TGCTCGGCCT CGACGTCGGC TGA
 
Protein sequence
MRAHEAGALH GNDAAPTWLP YPADVNTLID GLWSRTTARN AEGAVEVGGV DVRRIAEEVG 
TPAFVLDEDD FRHRARAFRD AFAEAFRPHR GADVYYAGKA FLCGAVARWV EEDGLGLDVC
TGGELAVALR AGFPASRIAL HGNNKSASEI RRALEAGVGR IVIDSLDEID QVDEIAARLG
LRAGVMLRVT TGVEAHTHEF IATAHEDQKF GLSLTGGSAF EAVHRVLDAP QLDLLGLHSH
IGSQIFDTGG FEVAARRVLQ LVARVRDELG HTIDQLDLGG GFGVMYNTQH TPSTPEALAA
GIAGIVEKQC HELELDVPHL AFEPGRAIAG PSTQTLYSVG TVKDVRLGGP HHRVYVSVDG
GMSDNVRTAL YDADYSCLLT GRVSEAAPEV VRVVGKHCES GDIVVKDEYL PADVRRGDLI
SVPVTGAYCY SLASNYNHVP RPPVIAVRDG EIRTLIRRET EEDLLGLDVG