Gene Bfae_18030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_18030 
Symbol 
ID8400349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2025773 
End bp2026855 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID644997866 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003155213 
Protein GI257068958 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.111375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCG CGCTCGACCC CGAGGCCGAG GACACCCCCC GGCGCACGCG CAGACGTGCG 
TCGGGAGGCC TCGGCCGCTA CATCCTCGTC CGCTTCCTGC TCATCATCCC CACCGTCCTC
ATCCTCATGA CGATGGTGTT CTTCCTGATG CGGATCACCG GCGACCCGAT CACCGCGGCC
CTCGGCGGCC GCCTCACCCC CGACCAGCTG GCGCAGCGAC GGGCCGAGGC CGGCTACGAC
CGCCCCCTGA TCGTGCAGTA CTTCGACTAC CTCGGCGGGG TGCTGCGCGG CGACTTCGGC
ACCACCTACA CCGACAACAC CCCCGTCACC GAGGTGCTGA CCACCTACGG CGCGGCGACC
TTCGAGCTGG TCGTGTACTC GCTCGTCGTG GCGCTGCTGC TCGGCGTGCC GCTGGGGATG
ATCGCGGCCC GCACCCGCGA CCGCTGGCCC GACGCCGTGC TGCGGATCAT CGCGATCCTC
GGCTACGCCA CCCCCGTCTT CTTCGTCGGC CTGCTGCTGA AGCTCGTGTT CTCCGTGGGC
CTGGGCTGGC TGCCCGTCGC GGGGAGGCTC TCGACCAGCG GGCAGATCAC GATGAGCACG
ATCCTCAACC CCTCCCCGTT CTCTCTGCTG GACGCGCTGC GGCTGGGGGA CACGGAGCTG
CTGAGGGACG TGCTCGGCCA CGCCGTGCTG CCGGCCGTGG CGCTCGGCAT CCTCACCGGC
GGGGTCTTCC TGCGCCTGGT GCGCACCAAC ATGATCGGCA CGCTGGAGAT GCAGTACATC
GAATCGGCCC GCTCGCGCGG CGTGGCCGAG ACCCGGCTGA CCACCCGCCA CGGGCTGCGG
CCCGCCCTGA TCCCGATCAT CACCGTGATG GGCATGCAGG TCGCGATGAT GCTCGGCGGC
GCGGTGCTCA CCGAGACCAC CTTCGAGTGG AACGGGCTGG GATACATGCT CGCCGAGTAC
ATGAAGGCCC GCGACTACAT CGCCGTGCAG GGCATCGTCA TGATGCTGGC CGTGATCGTC
GCGCTCTCGA ACTTCGTGGT CGACGTGATC GCCGCGCTCA TCGACCCGAG AGTGAGGTAC
TGA
 
Protein sequence
MSTALDPEAE DTPRRTRRRA SGGLGRYILV RFLLIIPTVL ILMTMVFFLM RITGDPITAA 
LGGRLTPDQL AQRRAEAGYD RPLIVQYFDY LGGVLRGDFG TTYTDNTPVT EVLTTYGAAT
FELVVYSLVV ALLLGVPLGM IAARTRDRWP DAVLRIIAIL GYATPVFFVG LLLKLVFSVG
LGWLPVAGRL STSGQITMST ILNPSPFSLL DALRLGDTEL LRDVLGHAVL PAVALGILTG
GVFLRLVRTN MIGTLEMQYI ESARSRGVAE TRLTTRHGLR PALIPIITVM GMQVAMMLGG
AVLTETTFEW NGLGYMLAEY MKARDYIAVQ GIVMMLAVIV ALSNFVVDVI AALIDPRVRY