Gene Bfae_17420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_17420 
Symbol 
ID8400288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp1947711 
End bp1948550 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content76% 
IMG OID644997806 
Productcompetence protein ComEA-like protein with helix-hairpin-helix repeat region 
Protein accessionYP_003155153 
Protein GI257068898 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.711078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCTC ATCCAGGGTC CGAGGGGTCG CGGCGAGGCC GCGCCGGGAG GCATCGCCGC 
ACCGGCCAGG CGCTGATCAC GCGGCGCGAC CACACCGCGG AGACCCCGGC CCGCCGCTTC 
ACGCTGCCCG CCCCCTCGCC GTCGGCGCTG GTGGGGATCG CCGTGCTCGT GCTCATCGCC 
GTCGGCGCGG TGCACCTCTC GGGCTCCGGC TCCGCAGTGC CGCTGGAGGA GGCGAGTCCC 
CAGGAGATCA CCGACGGGAC CTCACCGAGC ACCGGAACGC CCTCCGCGAA CGAGCCCACC 
GAGGTGGCCG AGGTGGCCGA GACCACTGAG ACCACGGAGG GCGCCGCAGC GGGGGCGGCA 
CCGGAGGACG GCGCCTCCGA CGAGCTGATC GTCCACGTCT CCGGAGCGGT CGCCGCACCG 
GGAGTGGTGC ACCTGCCCGG CGGCGCCCGG GTCGATGACG CGCTGCGCGC CGCCGGCGGG 
GCGACGGAGG AGGCCGAGCT CGCGGCCGTG AACCTCGCCC GTCCCCTCGT CGACGGCGAA 
CAGATCCACG TCCCCCTGCC CGGCGAACAG CCACCGCCCG CGGAGGACGG CCCGGCCGCG 
CCGCCGGGCG GCGGCGAGGG AAGCGGCCCG CCCGGCACGG ACGCCGGCGG AGCGATCGAT 
CTGAACACCG CGGGCGCGGC CGAGCTCGAG GAGCTGCCCG GCGTGGGCCC CGCCATCGCC 
CAGCGCATCC TCGAGCACCG GGAGAAGAAC GGCGCCTTCA CCTCGGTGGA CGGCCTCCTC 
GAGGTCTCCG GCATCGGGCC CGCCACCCTC GAGAAGATCC GTGCAGAGGC CACCGTATGA
 
Protein sequence
MGAHPGSEGS RRGRAGRHRR TGQALITRRD HTAETPARRF TLPAPSPSAL VGIAVLVLIA 
VGAVHLSGSG SAVPLEEASP QEITDGTSPS TGTPSANEPT EVAEVAETTE TTEGAAAGAA 
PEDGASDELI VHVSGAVAAP GVVHLPGGAR VDDALRAAGG ATEEAELAAV NLARPLVDGE 
QIHVPLPGEQ PPPAEDGPAA PPGGGEGSGP PGTDAGGAID LNTAGAAELE ELPGVGPAIA 
QRILEHREKN GAFTSVDGLL EVSGIGPATL EKIRAEATV