Gene Bfae_15220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_15220 
Symbol 
ID8400069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1715209 
End bp1715985 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content71% 
IMG OID644997588 
Producttriosephosphate isomerase 
Protein accessionYP_003154941 
Protein GI257068686 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.005965 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC CCCGCACCCC GCTGATGGCG GGCAACTGGA AGATGAACCT CGACTGGAAG 
CAGGGCCTCG CCCTGGTCGA GGAGCTCGGC GAGCACCTCA AGGAGGTCGA CACCTCGCTG
GTCGAGACCG TCGTGCTGCC GCCCTTCGTG GACCTGCGCA GCGTCCAGGT CGCGGTCGAC
GCCGGCAAGC TGCCGATCGC GTACGGCGCG CAGGACATCT CCGCCCACGA GTCCGGTGCG
TACACCGGCG AGGTCTCCGG CCCGATGCTG AAGACCCTCG GCTGCTCCTA CGCCGCGGTC
GGCCACTCCG AGCGCCGCCA GTACCACGGC GAGGACGAGG AGGTCACGAA TGCGAAGGTG
AAGGCCGCCT TCGCCGCGGA CATCACCCCG ATCCTGTGCG TCGGCGAGCC GCTCGAGGAG
CGTCAGGCCG GCAAGCACGT CGAGTACACC CTCGCCCAGC TCGAGGGAGG CATCGAGGGA
CTGGACGCCG CGCAGGCGAA GCGGATCGTC ATCGCCTACG AGCCCGTCTG GGCCATCGGC
ACCGGCGAGG TCGCCACCCC GGACGACGCC CAGGAGGTGT GCGCCGCGAT CCGTGAGGCG
CTGCGTGCGA TGCACGGCGA CGAGGTCGCC GACGCCGTCC GCGTCCTGTA CGGCGGCAGC
GTGAAGTCCG CCAACGTGGC CGAGCTCATG GAGAAGGCCG ACGTCGACGG CGCGCTCGTC
GGCGGCGCCT CGCTCAAGGC CGAGGAGTTC GCCAAGATCG CGGGCTTCCA GGGCTGA
 
Protein sequence
MTTPRTPLMA GNWKMNLDWK QGLALVEELG EHLKEVDTSL VETVVLPPFV DLRSVQVAVD 
AGKLPIAYGA QDISAHESGA YTGEVSGPML KTLGCSYAAV GHSERRQYHG EDEEVTNAKV
KAAFAADITP ILCVGEPLEE RQAGKHVEYT LAQLEGGIEG LDAAQAKRIV IAYEPVWAIG
TGEVATPDDA QEVCAAIREA LRAMHGDEVA DAVRVLYGGS VKSANVAELM EKADVDGALV
GGASLKAEEF AKIAGFQG