| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_14780 |
|---|
| Symbol | |
|---|
| ID | 8400025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1667969 |
|---|
| End bp | 1668808 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644997545 |
|---|
| Product | orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| Protein accession | YP_003154899 |
|---|
| Protein GI | 257068644 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGC TCCGCTTCGG GCAGCGCCTG CGCCGCGCCG TGGCCGACCG GGGGAGGATC
GTGGCGGGCA TCGATCCGCA CGCCTCCCTC CTGGAGGCGT GGTCGCTGCC GGACACGCCC
GAGGGGCTGC GGGAGTTCTC CCGCCGCTCC CTCGCCGCGG TCGCGGGCAC GGTCGCGGCG
ATCAAGCCGC AGTCGGCCTT CTTCGAGCGC CACGGCTCCG CCGGGGTCGC GGTGCTCGAA
GAGCTGCTGC GGGACGCGCG CGAGGCCGAG GTGCTCACGA TCCTCGACGT CAAGCGCGGC
GACATCGGCT CGACCATGGG CGCCTACGCG CAGGCCCACC TGTGCCCCGG CGCCCCTCTC
GAGGCCGACG CGATCACCGT CAGCCCGTAC CTTGGCGCCG GCTCGCTCGA CCCGGCGGCG
CAGCTCGCCG CCGAGCACGG CAAGGGCCTG TTCCTGCTGG CCCTCACCTC CAACCCGGAC
GGCCCGCAGG TCCAGCACGC CCGCACCGCG CGCGACACGC CGGTGGCGCT CGAGATCGCG
CGACACGCCG AGCGGATCGG CGGAGGCGGC GCAGGGGAGT GGTCGAGCGT CGGCCTGGTG
GTCGGCGCCA CGGTCGGCGC CGCCTACCGC GAGCTCGGCC TGGACCGCGC CGCGCCCTCC
GTGCCCCTGC TCGCGCCCGG TTTCGGCGCG CAGGGCGCAG GCCCTGCGCA GCTTCCTGAA
GTATTCGGAG AAAATGCAGG TCACGTGCTT GTTTCGCTCT CGCGCGGGCT CTCCACGGCG
GGGCCGGACG AGACCGCCCT CCGCCGCCGC GCCGAGGCGC TGCGGGCCGA GTACGCCTGA
|
|---|
| Protein sequence | MSRLRFGQRL RRAVADRGRI VAGIDPHASL LEAWSLPDTP EGLREFSRRS LAAVAGTVAA
IKPQSAFFER HGSAGVAVLE ELLRDAREAE VLTILDVKRG DIGSTMGAYA QAHLCPGAPL
EADAITVSPY LGAGSLDPAA QLAAEHGKGL FLLALTSNPD GPQVQHARTA RDTPVALEIA
RHAERIGGGG AGEWSSVGLV VGATVGAAYR ELGLDRAAPS VPLLAPGFGA QGAGPAQLPE
VFGENAGHVL VSLSRGLSTA GPDETALRRR AEALRAEYA
|
|---|
| |