Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_14350 |
Symbol | |
ID | 8399982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1617226 |
End bp | 1618527 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644997502 |
Product | RNA polymerase, sigma 70 subunit, RpoD |
Protein accession | YP_003154856 |
Protein GI | 257068601 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0336848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCTCCT CCAGTACTGC TGAGACCTCG CCCACGGCGA AGAGCTCGAC CCGCGCCGCG GCCACGAAGG CGGCGAACGG CACCGAGGCC GAGGCCGTCG AGACCGAGAC CGCCGACTCC ACCTCCAAGA CCACCGCGAA GAAGACCACC GCCAAGAAGT CGTCGACGCG CTCGTCCGCG CCGCGCAAGA CGGCGGCGAA GAAGGCCGCC GCTCCCAAGG AGCCCGAGGT CGACGCCGAG CCGGAGGAAG AGGCCGAGGA GGCCGAGGCT GGCAAGCGCG AATCGGCCAC GGACAAGAAG GTCGAAGCCT CCGGTGGGTT CGTCTACAAC GCCGCGGAGG ACGACGCCCC CGCGCAGCAG GTCGTCACGG CCGGTGCCAC CGCGGACCCG GTCAAGGACT ACCTCAAGCA GATCGGCAAG GTTGCGCTGC TCAACGCCGC CCAGGAGGTC GAGCTCGCCG AGCGGATCGA GGCGGGTCTG TACGCCGAGC AGAAGCTCAA GGGCGATGAC TCGTTCCGGG ACAAGAACGG CCGCCTCACC AAGGCCGGCC GCGAGCTGAC CATGATCGCG GACGACGGCC GTGCCGCCAA GGATCACCTG CTCGAGGCGA ACCTCCGTCT CGTGGTCTCC CTGGCCAAGC GCTACACGGG CCGCGGCATG CTCTTCCTGG ATCTGATCCA GGAGGGCAAC CTCGGTCTGA TCCGTGCGGT GGAGAAGTTC GACTACGCCA AGGGCTACAA GTTCTCCACC TACGCCACCT GGTGGATCCG TCAGGCGATC ACCCGCGCCA TGGCGGACCA GGCCCGCACG ATCCGCATCC CCGTGCACAT GGTCGAGGTC ATCAACAAGC TCGCCCGCGT GCAGCGGCAG ATGCTGCAGG ACCTCGGCCG CGAGCCCACC CCCGAGGAGC TCGCCAAGGA GCTGGACATG ACGCCCGAGA AGGTCGTCGA GGTCCAGAAG TACGGCCGTG AGCCGATCTC GCTGCACACT CCGCTGGGCG AGGACGGCGA CAGCGAGTTC GGCGACCTCA TCGAGGACTC CGAGGCTGTG GTCCCGGCCG ACGCGGTGAG CTTCACGCTG CTGCAGGAGC AGCTCCACTC GGTGCTGGAC ACCCTGTCCG AGCGGGAGGC GGGCGTGGTC TCGATGCGCT TCGGCCTCGA GGACGGCCAG CCCAAGACCC TCGACGAGAT CGGCAAGGTC TACGGCGTGA CCCGCGAGCG GATCCGCCAG ATCGAGTCCA AGACCATGTC GAAGCTGCGT CACCCCTCGC GGTCCCAGGT GCTGCGCGAC TACCTCGACT GA
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Protein sequence | MTSSSTAETS PTAKSSTRAA ATKAANGTEA EAVETETADS TSKTTAKKTT AKKSSTRSSA PRKTAAKKAA APKEPEVDAE PEEEAEEAEA GKRESATDKK VEASGGFVYN AAEDDAPAQQ VVTAGATADP VKDYLKQIGK VALLNAAQEV ELAERIEAGL YAEQKLKGDD SFRDKNGRLT KAGRELTMIA DDGRAAKDHL LEANLRLVVS LAKRYTGRGM LFLDLIQEGN LGLIRAVEKF DYAKGYKFST YATWWIRQAI TRAMADQART IRIPVHMVEV INKLARVQRQ MLQDLGREPT PEELAKELDM TPEKVVEVQK YGREPISLHT PLGEDGDSEF GDLIEDSEAV VPADAVSFTL LQEQLHSVLD TLSEREAGVV SMRFGLEDGQ PKTLDEIGKV YGVTRERIRQ IESKTMSKLR HPSRSQVLRD YLD
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