| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10940 |
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| Symbol | |
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| ID | 8399642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 1227631 |
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| End bp | 1230729 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644997167 |
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| Product | alpha-mannosidase |
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| Protein accession | YP_003154532 |
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| Protein GI | 257068277 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00976973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGACA ACCGCCCCAC CAGCGAGGAC CGGGTCCGCC GGTTCCTCCG CGAGCAGCTG
CCCGCCCGCC GCCACCTGGC CACCGCGCCG CTGACCATCG AGGCCTGGGA GGTGCCGGAC
GAGCCGGTCC CCTTCGAGGA GGCCCGCCGC CAGACCTACA CCCCGGTCTC CGTCGGCGAC
CGCTGGGGCC GCCCCTGGTC CACGCTCTGG CTGCACGTGA CCGGCCAGGT GCCCGTCTCC
TGGACCACCG GCGAGGACCG CGACATCGAG CTCCAGCTCG ACCTGTCCTT CACCAACATG
CCCGGCTTCC AGGCCGAGGC CCTCATCTGG ACCCCCGAGG GCGAGACCGT CAAGGCGATC
AACCCCTACA ACCAGTACCT CACCCTCGAA GCCGGCCAGG AGGTCGACTT CTACCTCGAG
TGCGCCGCGA ACCCCAACGT TCCCGGTGAC TGGACCTTCG CCCCCACCGC GCTGGGGGAC
AAGGCCACCG CGGGCGAGGA TCCCATCTAC GACCTCACCC AGCTGCGGCT GGCCTGGCGC
TCGAAGACCG TCTGGGAGCT CGAGCAGGAC ATCGTCGCGC TGAACGGCCT CATGCACACG
CTGCCCGAGC AGTCGGCCCG CCGCTTCGAC ATCCTCCATG CCCTGGGCAA GGCGCTGGAT
GCCGCGGACC CCGACGATCT GCACGGCACC GCCGCGGACG CCCGCGGCGA GCTGCGCGGC
GTGCTCGACG CGCCCGCGAA CGCCTCGGCC CTCACCGTCG TCGCGACCGG TCACGCCCAC
ATCGACTCCG CCTGGCTGTG GCCGGTGCGG GAGACCAAGC GCAAGTGCGC CCGGACCTTC
TCCAACGTCT GCTGGCTGCT GGAGCACTAC CCCCAGCTGG TCTTCTCCTG CTCCTCCGCC
CAGCAGTTCC AGTGGATCCG CGACGAGTAC CCCAGCCTGT TCCGCCGCAT CTCGGAGCAC
GTGGCCGCGG GCCGCTTCGT GCCCGTGGGC GGCATGTGGG TCGAATCGGA CACGAACATG
CCCAGCTCCG AGGCGATGGC GCGCCAGTTC ATCCACGGCA AGAAATTCTT CCTCGAGGAG
TTCGACTTCG AGACCAAGGA GACCTGGCTG CCGGACTCCT TCGGCTACTC CGCCGCGCTG
CCGCAGATCT GCGCGCTCGC CGGCAACGAT TCCTTCCTCA CCCAGAAGGT GTCCTGGAAC
CAGTACTCGA CGTTCCCCCA CCACACCTTC CAGTGGGAGG GCATCGACGG GACCACCCAG
TTCACCCACT TCCCGCCGAT CGACGCCTAC AACGGCCAGC TCACCGCCGC CGAGCTCGCG
TACTTCGAGA AGAACTTCAA GGACAAGGGC GCCAGCCACA TCGGCCTGAC CCCCACCGGC
TGGGGCGACG GCGGCGGCGG CCCCACCCGC GAGATGCTCG CCTCGCAGGA GCGCTTCGCT
GATCTCGACG GCGCCCCGAA GGTCGAGTGG TCCACCTCGC AGGACTTCTT CGCCCGCGCC
CGTGAGGAGT ACGTCGACGC GCCCGTCTGG AACGGGGAGC TCTACCTCGA GCTGCACCGC
GGCACCTACT CCTCGCAGAT CCTCGGCAAG CAGGGCAACC GCCGCACCGA GGCGCTCCTG
CACGACGTCG AGCTGTGGAG CGCCACGGCG GCCCGTCTCG TCGACGGCTT CGCCTACCCG
TACGAGGAGA TCGACTCGCT GTGGGACAAG CTGCTGCTGC TGCAGTTCCA CGACATCCTG
CCGGGCTCGT CGATCGCCTG GGTGCACCGC GAGACCGAGC AGTCCTACGA CTACATCACC
GAGCGGGGCG AGGCCCTCGT GGCCGCGGCC CTCGAGGCGC TCGGCGACGA CTCGGGCAGC
ACCGTCACCG CGAACTCCGC GGCCCGGGCG CGCCACGGCG TCGCGCCGCT GACGATCGCG
GCGCCGGCCG GCCCGGGGGC GGCGCCCGCG GTGGCGCAGG CGGGGGGCGC GATCACCGTG
ACCACCGACG CCCTGCACGT CGAGGTCGAC GAGCGCGGCC TGCTCACCTC GCTGCGTGCC
GGGACCGACG GGCGCGAGGC GATCGCGCCG GGTGCGTCCG GAGCCCTGCT CCAGCTGCAC
CGCGACGCCC CCAACGCCTG GGACTCCTGG GACATCGACG AATTCTACCG TCACGTGCAC
CGGGACCTGG AGGCCGAGGG CGCGCCCGTG CTCTCCCACG ACGAGGACGG CACCGTCCGC
ATCGCGGTCA CCTACCGCAC CCGTGAGGAC GGCGCCGCCG AGCGCCCCTT CGAGGGGATG
CCCTCGGTGG GCACCGGGTC GCGCATCACC GTGACCTACT CGATCGCCCC GGGCGCCGAG
GCGCTCGGCA TCGACCTGGA CGTGGACTGG CACGAGCGCA AGAAGGTGCT CAAGCTGGCG
TTCCCGCTCG ATGTCCGCGC CGCCGCGATG AGCAGCGAGA TCCAGTTCGG GTACATCGAC
CGTCCCATCC CCGTGAACAC CAACGAGGAC TTCGGCCGGT TCGAGACCTG CGCCCATCGC
TGGGTCCGCG TGGCCGAGTC GGACTACGGG ATCGTGCTGG CCAACGACTC CTCCTACGGC
CACGACGTGC GGCGCGTGCT GCGCGAGGAC GACGGCGGCA CCACCACGGT GGTCCGTGCG
ACCGTGCTGC GGGCGGCGGA GTTCCCGGAC CCTCAGGCCG AGGAGGGGCA GTACTCCCTG
CGCTACGCGA TCCGTCCCGA GGCGGACCAC GGGGACGCGG TGGATCTGGG CGAGGAGCTC
AACCAGCCGC TGCGCCCGGT GCAGCGTGCG GAGGAGCTCG CGCCGGTTGC GCAGCTGGTC
GGCGCCGACG GCGGGGCCGG CAGCGCCCGG ATCCAGACCG TCAAGCTCGC CGAGGACCGC
TCGGGCGACC TCGTGGTGCG CCTGTACGAA TCCGAGGGCC GCCGCACCGC GACCTCGCTC
GAGGTGCCCG GCGCCAGCTC GCTGACGGTG GTCGACCTCC TCGAGCGTCC GCTGACGGAG
CAGTCCCCGC TGGGGCACCG CGCAGCGACC GTCGAGGACG ACGCGCTCGC CCTCACCCTC
AAGCCCTTCG AGATCACGAC GGTCCGCGCG ACCTTCTGA
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| Protein sequence | MHDNRPTSED RVRRFLREQL PARRHLATAP LTIEAWEVPD EPVPFEEARR QTYTPVSVGD
RWGRPWSTLW LHVTGQVPVS WTTGEDRDIE LQLDLSFTNM PGFQAEALIW TPEGETVKAI
NPYNQYLTLE AGQEVDFYLE CAANPNVPGD WTFAPTALGD KATAGEDPIY DLTQLRLAWR
SKTVWELEQD IVALNGLMHT LPEQSARRFD ILHALGKALD AADPDDLHGT AADARGELRG
VLDAPANASA LTVVATGHAH IDSAWLWPVR ETKRKCARTF SNVCWLLEHY PQLVFSCSSA
QQFQWIRDEY PSLFRRISEH VAAGRFVPVG GMWVESDTNM PSSEAMARQF IHGKKFFLEE
FDFETKETWL PDSFGYSAAL PQICALAGND SFLTQKVSWN QYSTFPHHTF QWEGIDGTTQ
FTHFPPIDAY NGQLTAAELA YFEKNFKDKG ASHIGLTPTG WGDGGGGPTR EMLASQERFA
DLDGAPKVEW STSQDFFARA REEYVDAPVW NGELYLELHR GTYSSQILGK QGNRRTEALL
HDVELWSATA ARLVDGFAYP YEEIDSLWDK LLLLQFHDIL PGSSIAWVHR ETEQSYDYIT
ERGEALVAAA LEALGDDSGS TVTANSAARA RHGVAPLTIA APAGPGAAPA VAQAGGAITV
TTDALHVEVD ERGLLTSLRA GTDGREAIAP GASGALLQLH RDAPNAWDSW DIDEFYRHVH
RDLEAEGAPV LSHDEDGTVR IAVTYRTRED GAAERPFEGM PSVGTGSRIT VTYSIAPGAE
ALGIDLDVDW HERKKVLKLA FPLDVRAAAM SSEIQFGYID RPIPVNTNED FGRFETCAHR
WVRVAESDYG IVLANDSSYG HDVRRVLRED DGGTTTVVRA TVLRAAEFPD PQAEEGQYSL
RYAIRPEADH GDAVDLGEEL NQPLRPVQRA EELAPVAQLV GADGGAGSAR IQTVKLAEDR
SGDLVVRLYE SEGRRTATSL EVPGASSLTV VDLLERPLTE QSPLGHRAAT VEDDALALTL
KPFEITTVRA TF
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