Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_10380 |
Symbol | |
ID | 8399586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1165255 |
End bp | 1167516 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644997111 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_003154476 |
Protein GI | 257068221 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0265534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGG AAGGCCCTGA AATCACCGCT ACCACCGCGG TCATCGACAA CGGCTCCTAC GGGCGCCGCG AGATCCGCTT CGAGACCGGC CGGCTCGCGC AGCAGGCCGC CGGCGCCGTC GCCGTCTACC TCGACGACGA CACGATGGTG TTCTCCGCGA CCGCCGTCTC GAACAAGCCG AAGGAGCACT TCGACTTCTT CCCGCTGACC ATCGACGTCG AGGAGCGGAT GTACGCCGCG GGCCGCATCC CCGGCTCCTT CTTCCGCCGC GAGGGCCGTC CCGGCACCGA CGCGATCCTC GCCGCACGCC TCACCGACCG CCCGCTGCGC CCCGCCTTCG TCAAGGGCCT GCGCAACGAG GTCCAGGTCG TCCTGACCGT CATGGCCAAC GGGCCGGACG ACGCGTACGA CGTCGTCGGC ATCAACGGCG CCTCCGCCTC CACGCAGATC TCCGGCCTGC CCTTCTCCGG CCCGATCGGC GCGGTGCGCA TCGCGCTCAT GCCCAACTCC CAGGGCGGCG GCCAGTGGGT CGCCTTCCCG ACCTTCTCGC AGCTCGACGA GGCCGTGTTC TCCATGGTCG TCGCGGGACG CATCGTGGAA GACGATGTGG CGATCATGAT GGTCGAGGCC GAGGCCACCG ACAACTCCTG GAACCTCATC AAGGAGCAGG GAGCGATCGC CCCGACCGAG TCCGTCGTGG CCGAGGGCAT CGAGGCCGCG AAGGTCTTCA TCCGCAGCCT GTGCGTGGCC CAGCAGGAGC TGGCCGCCAC CGCCGCCAAG CCGGTGCGCG AGTTCCCGCT GTTCCTGGAC TACCAGGACG ACGCCTACGA GATCGTCGAG GCCGCCGCCA CCGAGCGTCT CGCCGAGGTC ATGTCGATCG CGGCCAAGAC CGAGCGCGAG GAGCGCACCG AGCAGCTGCT CGCCGAGATC ACCGAGGAGC TCTCCGGCGA GGGGAAGCAG CTCGAGGACC GCGAGAAGGA GGTCACCGGG GCGTTCCGCG CGCTGACCAA GCAGGTCGTG CGCAAGAAGG TCCTCACCGA GGGCGTGCGC ATCGACGGCC GCGGCCTGCG TGACATCCGT GCGCTCTCCG CCGAGGTCGA GGTGCTCCCG CGGGTCCACG GCTCGGCCCT GTTCCAGCGC GGTGAGACCC AGATCATGGG CGTGTCCACG CTGAACATGC TGAAGATGGA GCAGCAGATC GACTCGCTCG GCCCGGTCGA GCGCAAGCGC TACATCCACC ACTACAACTT CCCGCCCTAC TCCACCGGTG AGACCGGTCG CGTCGGCTCC CCGAAGCGTC GCGAGGTCGG GCACGGCATG CTCGCCGAGC GCGCGATCGT GCCGGTGCTG CCCAGCCGCG AGGAGTTCCC CTACGCGATC CGCCAGGTCT CCGAGGCGCT GGGCTCCAAC GGCTCCACGT CGATGGGCTC CGTCTGCGCC TCGACCCTGT CGCTGCTGAA CGCCGGTGTG CCGCTGCGCG CGCCGGTCGC CGGCATCGCC ATGGGCCTCA TCTCCGACAC CATCGAGGGG GAGATCCGCT ACGCGGCCCT CACCGACATC CTCGGTGCGG AGGACGCCTT CGGCGACATG GACTTCAAGG TCGCCGGCAC CGGTGAGTTC ATCACCGCGA TCCAGCTGGA CACCAAGCTC GACGGCCTCC CGGCCTCCGT GCTCACCGGT GCGCTGTCGC AGGCGCACGA GGCGCGCCTG GCGATCCTCG GCGTGCTCGG CGAGGCGATC GACGCGCCCG ACGAGATGAG CCCCAACGCC CCGCGCGTCC TCGCGGTCAC CGTCCCGGTC GACAAGATCG GTGCGGTCAT CGGCCCGAAG GGCCAGATGA TCAACCAGAT CCAGGACGAC ACCGGTGCGG ACATCACCAT CGAGGACGAC GGCACCGTGT ACATCGGTGC GACCGACGGC CCCTCGGCGG AGGCCGCGCG CTCCGCGGTC AACGCGATCG CGAACCCGAT GGTCCCCGAG GTCGGCGAGC GCTACCTCGG CACCGTCGTG CGCGTGGTCG ACTTCGGCGC CTTCATCTCG CTCACCCCGG GCAAGGACGG CCTGCTGCAC GTCACCCAGC TGCGCAAGCT CAACGGCGGC AAGCGGGTCG ACAACGTCGA GGACGTCGCC ACGGTGGGGC AGAAGATCGA GGTGGAGATC CGCGAGATCG ACGCCCGCGG CAAGATCTCC CTCGCCGTGA TCGAGGAGGA CGAGGCGGAG TCCGCCGAGT CCGCCGCCTC GGAGGCGACC ACCGCCGAGT GA
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Protein sequence | MAMEGPEITA TTAVIDNGSY GRREIRFETG RLAQQAAGAV AVYLDDDTMV FSATAVSNKP KEHFDFFPLT IDVEERMYAA GRIPGSFFRR EGRPGTDAIL AARLTDRPLR PAFVKGLRNE VQVVLTVMAN GPDDAYDVVG INGASASTQI SGLPFSGPIG AVRIALMPNS QGGGQWVAFP TFSQLDEAVF SMVVAGRIVE DDVAIMMVEA EATDNSWNLI KEQGAIAPTE SVVAEGIEAA KVFIRSLCVA QQELAATAAK PVREFPLFLD YQDDAYEIVE AAATERLAEV MSIAAKTERE ERTEQLLAEI TEELSGEGKQ LEDREKEVTG AFRALTKQVV RKKVLTEGVR IDGRGLRDIR ALSAEVEVLP RVHGSALFQR GETQIMGVST LNMLKMEQQI DSLGPVERKR YIHHYNFPPY STGETGRVGS PKRREVGHGM LAERAIVPVL PSREEFPYAI RQVSEALGSN GSTSMGSVCA STLSLLNAGV PLRAPVAGIA MGLISDTIEG EIRYAALTDI LGAEDAFGDM DFKVAGTGEF ITAIQLDTKL DGLPASVLTG ALSQAHEARL AILGVLGEAI DAPDEMSPNA PRVLAVTVPV DKIGAVIGPK GQMINQIQDD TGADITIEDD GTVYIGATDG PSAEAARSAV NAIANPMVPE VGERYLGTVV RVVDFGAFIS LTPGKDGLLH VTQLRKLNGG KRVDNVEDVA TVGQKIEVEI REIDARGKIS LAVIEEDEAE SAESAASEAT TAE
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