Gene Bfae_10380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_10380 
Symbol 
ID8399586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1165255 
End bp1167516 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content70% 
IMG OID644997111 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_003154476 
Protein GI257068221 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase
[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0265534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGG AAGGCCCTGA AATCACCGCT ACCACCGCGG TCATCGACAA CGGCTCCTAC 
GGGCGCCGCG AGATCCGCTT CGAGACCGGC CGGCTCGCGC AGCAGGCCGC CGGCGCCGTC
GCCGTCTACC TCGACGACGA CACGATGGTG TTCTCCGCGA CCGCCGTCTC GAACAAGCCG
AAGGAGCACT TCGACTTCTT CCCGCTGACC ATCGACGTCG AGGAGCGGAT GTACGCCGCG
GGCCGCATCC CCGGCTCCTT CTTCCGCCGC GAGGGCCGTC CCGGCACCGA CGCGATCCTC
GCCGCACGCC TCACCGACCG CCCGCTGCGC CCCGCCTTCG TCAAGGGCCT GCGCAACGAG
GTCCAGGTCG TCCTGACCGT CATGGCCAAC GGGCCGGACG ACGCGTACGA CGTCGTCGGC
ATCAACGGCG CCTCCGCCTC CACGCAGATC TCCGGCCTGC CCTTCTCCGG CCCGATCGGC
GCGGTGCGCA TCGCGCTCAT GCCCAACTCC CAGGGCGGCG GCCAGTGGGT CGCCTTCCCG
ACCTTCTCGC AGCTCGACGA GGCCGTGTTC TCCATGGTCG TCGCGGGACG CATCGTGGAA
GACGATGTGG CGATCATGAT GGTCGAGGCC GAGGCCACCG ACAACTCCTG GAACCTCATC
AAGGAGCAGG GAGCGATCGC CCCGACCGAG TCCGTCGTGG CCGAGGGCAT CGAGGCCGCG
AAGGTCTTCA TCCGCAGCCT GTGCGTGGCC CAGCAGGAGC TGGCCGCCAC CGCCGCCAAG
CCGGTGCGCG AGTTCCCGCT GTTCCTGGAC TACCAGGACG ACGCCTACGA GATCGTCGAG
GCCGCCGCCA CCGAGCGTCT CGCCGAGGTC ATGTCGATCG CGGCCAAGAC CGAGCGCGAG
GAGCGCACCG AGCAGCTGCT CGCCGAGATC ACCGAGGAGC TCTCCGGCGA GGGGAAGCAG
CTCGAGGACC GCGAGAAGGA GGTCACCGGG GCGTTCCGCG CGCTGACCAA GCAGGTCGTG
CGCAAGAAGG TCCTCACCGA GGGCGTGCGC ATCGACGGCC GCGGCCTGCG TGACATCCGT
GCGCTCTCCG CCGAGGTCGA GGTGCTCCCG CGGGTCCACG GCTCGGCCCT GTTCCAGCGC
GGTGAGACCC AGATCATGGG CGTGTCCACG CTGAACATGC TGAAGATGGA GCAGCAGATC
GACTCGCTCG GCCCGGTCGA GCGCAAGCGC TACATCCACC ACTACAACTT CCCGCCCTAC
TCCACCGGTG AGACCGGTCG CGTCGGCTCC CCGAAGCGTC GCGAGGTCGG GCACGGCATG
CTCGCCGAGC GCGCGATCGT GCCGGTGCTG CCCAGCCGCG AGGAGTTCCC CTACGCGATC
CGCCAGGTCT CCGAGGCGCT GGGCTCCAAC GGCTCCACGT CGATGGGCTC CGTCTGCGCC
TCGACCCTGT CGCTGCTGAA CGCCGGTGTG CCGCTGCGCG CGCCGGTCGC CGGCATCGCC
ATGGGCCTCA TCTCCGACAC CATCGAGGGG GAGATCCGCT ACGCGGCCCT CACCGACATC
CTCGGTGCGG AGGACGCCTT CGGCGACATG GACTTCAAGG TCGCCGGCAC CGGTGAGTTC
ATCACCGCGA TCCAGCTGGA CACCAAGCTC GACGGCCTCC CGGCCTCCGT GCTCACCGGT
GCGCTGTCGC AGGCGCACGA GGCGCGCCTG GCGATCCTCG GCGTGCTCGG CGAGGCGATC
GACGCGCCCG ACGAGATGAG CCCCAACGCC CCGCGCGTCC TCGCGGTCAC CGTCCCGGTC
GACAAGATCG GTGCGGTCAT CGGCCCGAAG GGCCAGATGA TCAACCAGAT CCAGGACGAC
ACCGGTGCGG ACATCACCAT CGAGGACGAC GGCACCGTGT ACATCGGTGC GACCGACGGC
CCCTCGGCGG AGGCCGCGCG CTCCGCGGTC AACGCGATCG CGAACCCGAT GGTCCCCGAG
GTCGGCGAGC GCTACCTCGG CACCGTCGTG CGCGTGGTCG ACTTCGGCGC CTTCATCTCG
CTCACCCCGG GCAAGGACGG CCTGCTGCAC GTCACCCAGC TGCGCAAGCT CAACGGCGGC
AAGCGGGTCG ACAACGTCGA GGACGTCGCC ACGGTGGGGC AGAAGATCGA GGTGGAGATC
CGCGAGATCG ACGCCCGCGG CAAGATCTCC CTCGCCGTGA TCGAGGAGGA CGAGGCGGAG
TCCGCCGAGT CCGCCGCCTC GGAGGCGACC ACCGCCGAGT GA
 
Protein sequence
MAMEGPEITA TTAVIDNGSY GRREIRFETG RLAQQAAGAV AVYLDDDTMV FSATAVSNKP 
KEHFDFFPLT IDVEERMYAA GRIPGSFFRR EGRPGTDAIL AARLTDRPLR PAFVKGLRNE
VQVVLTVMAN GPDDAYDVVG INGASASTQI SGLPFSGPIG AVRIALMPNS QGGGQWVAFP
TFSQLDEAVF SMVVAGRIVE DDVAIMMVEA EATDNSWNLI KEQGAIAPTE SVVAEGIEAA
KVFIRSLCVA QQELAATAAK PVREFPLFLD YQDDAYEIVE AAATERLAEV MSIAAKTERE
ERTEQLLAEI TEELSGEGKQ LEDREKEVTG AFRALTKQVV RKKVLTEGVR IDGRGLRDIR
ALSAEVEVLP RVHGSALFQR GETQIMGVST LNMLKMEQQI DSLGPVERKR YIHHYNFPPY
STGETGRVGS PKRREVGHGM LAERAIVPVL PSREEFPYAI RQVSEALGSN GSTSMGSVCA
STLSLLNAGV PLRAPVAGIA MGLISDTIEG EIRYAALTDI LGAEDAFGDM DFKVAGTGEF
ITAIQLDTKL DGLPASVLTG ALSQAHEARL AILGVLGEAI DAPDEMSPNA PRVLAVTVPV
DKIGAVIGPK GQMINQIQDD TGADITIEDD GTVYIGATDG PSAEAARSAV NAIANPMVPE
VGERYLGTVV RVVDFGAFIS LTPGKDGLLH VTQLRKLNGG KRVDNVEDVA TVGQKIEVEI
REIDARGKIS LAVIEEDEAE SAESAASEAT TAE