Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_10220 |
Symbol | ispG |
ID | 8399570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1146727 |
End bp | 1147887 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644997095 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_003154460 |
Protein GI | 257068205 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTTCTG TGAGCCTCGG TATCCCCTCC GTCAAGCAGC CACCGCCGGT GCTCGCCCCC CGGCGGAAGA CCCGCAAGGT CAAGCTCGGC GACCTCTACG TGGGCGGCGA CGCACCGATC ACGGTGCAGT CGATGACCAC CACCCCCACG CACGACATCA ACGCGACCCT GCAGCAGATC GCGGAGCTGA CCACGGCGGG CTGCGACATC GTGCGCGTGG CCTGCCCCCG GCAGGAGGAC GCCGACGCGC TGGTCGCGAT CGCCGCGAAG TCCCCGATTC CGGTGATCGC CGACATCCAC TTCCAGCCCA AGTACGTCTT CGCCGCGATC GAGGCCGGCT GCGCGGGGGT CCGCGTGAAC CCCGGCAACA TCCGCCGCTT CGACGACCAG GTCAAGGACA TCGCCAAGGC CGCGAACGAC CACGGCACCG CTCTGCGCAT CGGCGTGAAC GCCGGCAGCA TCGACAAGCG CATGATGACC GGCGACCGCG TCACCCCGGA GGCCCTGGTC GCCTCCGCGA AGTGGGAGGC CTCCCTCTTC GAGGAGCACG GCTTCCACGA CTTCGGCATC TCCGTGAAGC ACAACGACCC GATCATCATG GTCGAGGCGT ACCGCCAGCT CTCCGAGGCG GGGGACTGGC CGCTGCACCT GGGCGTCACC GAGGCAGGGC CCGCCTTCCA GGGCACCATC AAGTCCTCCA TCGCCTTCGG CATCCTGCTG GGCGAGGGCA TCGGCGACAC GATCCGCGTC TCGCTCTCGG CCCCGCCGGT CGAGGAGGTC AAGGTCGGCA ACCAGATCCT GCAGTCGCTG AACCTCAAGC CGCGCAAGCT GGACATCGTC TCGTGCCCCT CCTGCGGCCG TGCCCAGGTG GACGTCTACA CCCTCGCCGA CAAGGTCACC GAGGGGCTCA AGCACCTCGA GGTGCCGCTG CGCGTGGCCG TGATGGGCTG CGTCGTCAAC GGTCCGGGCG AGGCCCGCGA AGCGGATCTC GGCGTGGCCT CCGGCAACGG CAAGGGCCAG ATCTTCGTCA AGGGCGAGGT CATCAAGACC GTCCCGGAGG AGGACATCGT CGAGACCCTG CTGGCCGAGG CCAACCGGAT CGCGGCCGAG ATGGGCGAGG ACGCGTCCGC CGGCAGCGCC CCGTCGGTCT CCGTGGGCTG A
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Protein sequence | MTSVSLGIPS VKQPPPVLAP RRKTRKVKLG DLYVGGDAPI TVQSMTTTPT HDINATLQQI AELTTAGCDI VRVACPRQED ADALVAIAAK SPIPVIADIH FQPKYVFAAI EAGCAGVRVN PGNIRRFDDQ VKDIAKAAND HGTALRIGVN AGSIDKRMMT GDRVTPEALV ASAKWEASLF EEHGFHDFGI SVKHNDPIIM VEAYRQLSEA GDWPLHLGVT EAGPAFQGTI KSSIAFGILL GEGIGDTIRV SLSAPPVEEV KVGNQILQSL NLKPRKLDIV SCPSCGRAQV DVYTLADKVT EGLKHLEVPL RVAVMGCVVN GPGEAREADL GVASGNGKGQ IFVKGEVIKT VPEEDIVETL LAEANRIAAE MGEDASAGSA PSVSVG
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