| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10100 |
|---|
| Symbol | |
|---|
| ID | 8399558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1135364 |
|---|
| End bp | 1136362 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644997083 |
|---|
| Product | site-specific recombinase XerD |
|---|
| Protein accession | YP_003154448 |
|---|
| Protein GI | 257068193 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG AGCGGGAGCA CGCCGATGAC GCGGTCCTCG ACGCCTTCGC CGACCATCTG
CACCTCGAAC GGGGCAGATC CGAGCACACC GTGCGCGCCT ATCGGCGCGA GGCGGCCGGG
CTGCTCGCGC ATCTGCGCAC CGTCGAGCGG ATCACGCTGC CCGAGCTCGA TGTGACCGCG
CTGCGCTCCT GGCTCTCCGC CCGCGCCGAG ACCGGAGCGA GCGCGAGCAC GCTGGCACGC
TCCGCAGCCT CGGTGCGCAC CTTCACCACC TGGCTCGCCT CCACCGGACG GATCCCGCAC
GACGTCGGCG GTCGCCTGAG AGCACCGCGC CGCGGACGCC ACCTGCCGAC GGTGCTCACC
GGCGACCAGG CAGGCGAGCT GCTCGACGGG CTCGACGGCT CCGCGCGGGA CGACTCCGCC
GCACCGCCCC GCGAGATCGC CGCCGCGCCC CGCGCCGAGC AGGACCCGCG AGACCGGGCG
GTGCTGCTGC GCGACGCCGC CGTCCTCGAG CTGCTCTACT CCTCGGGCCT GCGCGTCTCC
GAGCTGGTCG CCCTCGACCG CTCGAGGATC GACCGGCAGC ACGGCACCGT GCGGGTGCGC
GGCAAGGGGG ACAGGGAGCG GATCGTCCCG GTGGGCCTCC CGGCGCTGGA GGCTCTCCAG
CGCTGGGAGA GCGAGGGCCG GCCCGTGCTG CTCGCGGCCG CGACCCCCGG GACACCCCCC
GGCGACGCCC TGTTCCTCGG CGTGCGCGGG GGCCGCCTCG GCGACCGGGC CGTGCGCACC
CTGGTGGACC GTCACGTGGC GGAGGCCGGG ATCAGCCGCC ACGTCACCCC GCACACCCTG
CGCCACAGCG CCGCCACCCA CCTCGTGGAG GGCGGCGCCG ACCTGCGCAG CGTGCAGGAC
TTCCTGGGCC ACTCCTCCCT CGCCACCACG CAGATCTACA CGCACGTGAG CGCGGAACGG
CTGCGCCGCA CCGTCGACCA GGCCCACCCC CGCGCCTGA
|
|---|
| Protein sequence | MSTEREHADD AVLDAFADHL HLERGRSEHT VRAYRREAAG LLAHLRTVER ITLPELDVTA
LRSWLSARAE TGASASTLAR SAASVRTFTT WLASTGRIPH DVGGRLRAPR RGRHLPTVLT
GDQAGELLDG LDGSARDDSA APPREIAAAP RAEQDPRDRA VLLRDAAVLE LLYSSGLRVS
ELVALDRSRI DRQHGTVRVR GKGDRERIVP VGLPALEALQ RWESEGRPVL LAAATPGTPP
GDALFLGVRG GRLGDRAVRT LVDRHVAEAG ISRHVTPHTL RHSAATHLVE GGADLRSVQD
FLGHSSLATT QIYTHVSAER LRRTVDQAHP RA
|
|---|
| |