| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_09690 |
|---|
| Symbol | valS |
|---|
| ID | 8399517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1092142 |
|---|
| End bp | 1094829 |
|---|
| Gene Length | 2688 bp |
|---|
| Protein Length | 895 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644997043 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_003154408 |
|---|
| Protein GI | 257068153 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA CCGCATCCCG CCCCGACACC GGCTCCGCCC TCCCCGATCG CCCCTCCCTC
GAGGGTCTGG AGGAGAAGTG GGACGGCGTA TGGAGTGCGC AGGAGCTGTA CGCCTTCGAC
CCGGAGACCA CCCGTGACCA GGTCTTCAGC GTGGACACCC CGCCGCCCAC CGCCTCCGGC
TCCCTGCACA TCGGTCACGT CTTCGGCTAC TCGCAGGCCG ACATGATCGT GCGCTACCAG
CGCATGCGGG GCATGAACTG CTTCTACCCG TTGGGCTGGG ACGACAACGG CCTGCCCACC
GAGCGCCGCG CCCAGAACTA TTACGGGGTG CGCTGCGATC CCTCGCTGCC CTACGACCCG
GACTTCACGC CCCCGCAGGA GGGCGGCTCG AACAAGTCCT CGAAGGCCGC GAACCAGCTG
CCGATCTCGC GCCGGAACTT CATCGAGCTG TGCGAGCAGC TGACCACGCT CGACGAGAAG
TCGTTCGAGG AGGTCTTCCG CACGCTGGGC CTCTCGGTGG ACTGGAACCA CAGCTACCAG
ACCATCGATG CCCGCTCCCG CGCCACCTCC CAGCGCGCCT TCCTCGAGAA CCTCGCCAAG
GGCCAGGCCT ACCAGGCCGA GGCTCCCACC ATGTGGGACG TCACCTATCG CACCGCGGTC
GCGCAGGCCG AGCAGGAGGA TCGCGAGCGG GACGGCGCGT ACCACCGCAT CGGCTTCACC
CGCACGAACG CGGCCGACGG CGCAGACGCC ACCGTGTACA TCGAGACCAC CCGCCCCGAG
CTGCTGCCGG CATGTGTGGC GCTCGTGGCC CACCCCGAGG ACGAGCGCTA CCAGGAGCTG
TTCGGCACCA CCGTCACCTC CCCGCTGTTC GGGGTCGAGG TGCCGGTGAT GGCGCATCCG
CTGGCCCAGC CCGACAAGGG CGCCGGCATC GCCATGATCT GCACCTTCGG CGACTCCAAC
GACGTCACCT GGTGGCGTGA GCTCGAGCTG CCCACCCGCT CCGTGGTGGG GCGCGACGGC
CGCTTCCTGC CCGAGGCGCC GTGGATCACC ACGGCCGAGG GGCAGGCCGC CTACGCCGAG
CTGGTGGGCC TGACCGTGTT CAGCGCGCAG AAGCGCGTGG TGGAGATGGT CACCGAGTCC
GGCGACCTCG TGGGCGAGCC GGAGAAGATC ACCCATCCGG TGAAGTTCTA CGAGAACGGC
GACAAGCCGC TCGAGTTCGT CACCTCGCGG CAGTGGTATC TCACCAACGG CGGCCGCGAC
CAGTCCGAGG GCGGGCTGCG TGACGCGCTG ATCGCCCGCG GGGCCGAGAT GACCTGGCAC
CCGGCCTACA TGGAGTCCCG CTACCGCAAC TGGGTGGAGG GCCTGGCCGG CGACTGGCTG
ATCTCGCGCC AGCGCTTCTA CGGCGTGCCC TTCCCCGTCT GGTACGGCGT GGGCGCCGAT
GGCGAGACCG ACTACTCCAC GGTGCTCACC CCTGCGGTCG AGGACCTGCC CGTGGATCCC
ACGATCGATG TGCCGGCAGG ATTCACCGAG GAGCAGCGCG ACCAGCCCGG GGGCTTCGTC
GCCGATCCGG ACATCCTCGA CACCTGGGCC ACCTCCTCTC TCACCCCGCA GCTCGCGGGC
GGCTGGAACG CCCAGGACGA CGGCGAGCTG TTCTCGAAGG TGTACCCGAT GGACCTGCGC
CCGCAGGGCC ACGACATCAT CCGCACCTGG CTGTTCTCCA CGATCGTGCG CTCGCATCTG
CAGCAGGATT CGCTGCCCTG GAAGCACGCC TCGATCAACG GCTGGATCCT CGATCCGGAC
CGCAAGAAGA TGTCGAAGTC GAAGGGCAAT GTGGTCACCC CGCTGGGCCT GCTCCAGCAG
CACGGCTCCG ACGGGGTGCG CTACTGGGCG GGCCGGGCCC GCCAGGGCGT GGACACCGCC
TTCGACGAGG GGCAGATGAA GATCGGCCGC CGCCTGGCGA TCAAGATCCT CAACGCCTCG
AAGTTCGCGC TCGGCTTCGG CGAGGCCCCG GCGGACCCGT CGGGCCGCCT GGCCGCGGAC
CCCGCCGTGG TCACCGATCC GCTGGACCGG GCGCTGCTCG CGCAGCTGGC CGACGTGGTC
GAGCAGTCCA CCGCCGCCTT CGACGAGATG GACTATGCCC GCAGCCTCGA GGTGGCCGAG
CCGTTCTTCT GGGCGTTCTG CGACGACTAC ATCGAGCTGG TCAAGGAGCG CGCCCACGGC
AACTCTCCCG ATGGCGAGGT CGGGGCCGCC TCGGCCCGGG CGGCGCTCGC GATCGCGCTC
GAGGTGCTGC TGCGGCTGTT CGCGCCGGTG ATCGTCTTCG CGACCGAGGA GGTCTGGTCG
TGGTGGCGCG AGGGCAGCGT GCACACCCAG CCCTGGCCGG AGGCGGCGCC GCTGCGTGAG
GCCGCTGCCG GTCAGGACGC GGCGCTGGTG GACTCGGTGG CGCAGGCGGC GATCACGCTG
CGGCGCATCA AGTCCGATGC CAAGGTGTCC CAGAAGACCC CGATCCTCTC GGTGACGATC
GAGGCGCCGC AGGAGGCGCT GGCCTATCTG GAGGCCGCCT CCGCGGATCT CACGGCGCTG
GGCCGGATCG AGAAGTTCGA GCTGGTCACC GGGCAGGGCG AGGAGATCCT CACCCGGGAC
GTCGAGCTGG GCGAGCCGCC GGTCAAGCAG CCGCGCGCCA AGGGCTGA
|
|---|
| Protein sequence | MTDTASRPDT GSALPDRPSL EGLEEKWDGV WSAQELYAFD PETTRDQVFS VDTPPPTASG
SLHIGHVFGY SQADMIVRYQ RMRGMNCFYP LGWDDNGLPT ERRAQNYYGV RCDPSLPYDP
DFTPPQEGGS NKSSKAANQL PISRRNFIEL CEQLTTLDEK SFEEVFRTLG LSVDWNHSYQ
TIDARSRATS QRAFLENLAK GQAYQAEAPT MWDVTYRTAV AQAEQEDRER DGAYHRIGFT
RTNAADGADA TVYIETTRPE LLPACVALVA HPEDERYQEL FGTTVTSPLF GVEVPVMAHP
LAQPDKGAGI AMICTFGDSN DVTWWRELEL PTRSVVGRDG RFLPEAPWIT TAEGQAAYAE
LVGLTVFSAQ KRVVEMVTES GDLVGEPEKI THPVKFYENG DKPLEFVTSR QWYLTNGGRD
QSEGGLRDAL IARGAEMTWH PAYMESRYRN WVEGLAGDWL ISRQRFYGVP FPVWYGVGAD
GETDYSTVLT PAVEDLPVDP TIDVPAGFTE EQRDQPGGFV ADPDILDTWA TSSLTPQLAG
GWNAQDDGEL FSKVYPMDLR PQGHDIIRTW LFSTIVRSHL QQDSLPWKHA SINGWILDPD
RKKMSKSKGN VVTPLGLLQQ HGSDGVRYWA GRARQGVDTA FDEGQMKIGR RLAIKILNAS
KFALGFGEAP ADPSGRLAAD PAVVTDPLDR ALLAQLADVV EQSTAAFDEM DYARSLEVAE
PFFWAFCDDY IELVKERAHG NSPDGEVGAA SARAALAIAL EVLLRLFAPV IVFATEEVWS
WWREGSVHTQ PWPEAAPLRE AAAGQDAALV DSVAQAAITL RRIKSDAKVS QKTPILSVTI
EAPQEALAYL EAASADLTAL GRIEKFELVT GQGEEILTRD VELGEPPVKQ PRAKG
|
|---|
| |