Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_08840 |
Symbol | |
ID | 8399432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 1004060 |
End bp | 1005838 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644996960 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003154328 |
Protein GI | 257068073 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCTCAG CACCACCGCA CGCCTCTCCG CCCGCCACCG CCTCCGCAGC CCCCGCCGGC TCCCCGGCCG CCTTCACCGG CCTCGACCGC CAGGGGAAGC TGGTCTTCGT CGGCCTCATG CTGGGCATGT TCGTCGCCTC GCTCTCCCAG ACGATCGTCG GCCCCGCGCT GCCCCGCATC GTCGCCGAGC TCGGCGGCGT CGAGTACTAC AGCTGGGTCG CGACCGCCGC GATGCTGGTC TCCGCCGTCG CCGTCCCGAT CGTCGGCAAG CTCTCCGATC TCTACGGGCG GCGCTGGTTC TACCTCGCCG GCCTCGCGAT CTTCATGCTC GGCTCGATCC TCGCCGGGAT GGCCACGAAC TTCTGGTTCC TCGTCGGCGC CCGCGCCGTG CAGGGACTGG GCATGGGCAC CCTGATGCCG CTGAGCCAGA CGATCATCGG CGACATCATC CCGCCGCGGC AGCGCGGCAA GTACCAGGGC ATCATGGGCG CCGTCTTCGG CGTGACCTCC GTGGTGGGGC CGCTGCTCGG CGGCACCGTC ACCGACAACC TCGGCTGGCG CTGGCTGTTC TACCTGACCC TGCCCATCGG CGTGGTCGCC TTCGCGTTCA TCCTGCGCTA CCTCCATCTG CCGCGCGCGG CGCAGCGCGG CAAGGTCGAC CTGCTCGGCA TCGCGACCCT CACCCCCGGC CTGGTCATCG GCCTGCTCGC GACCACCTGG GGCGGCAACG ACTTCGCCTG GGGCTCGCCG GTGATCATCG GGATGTACGC GGTCGCCGCG GTGCTGCTGA TCGCCTTCGT GATCATCGAG ACCCGCGTCG AGGAGCCGCT GCTCCCGATG CACCTGATCA CCCGGCCGAT CATCGCGCTC TCGGTCGGCG CCTCCTTCGC GATCGCGGTG GCGATGTTCG GCGCGATCAT CTACATCCCC GTCTACGCGC AGGGCGTCAT GGGGGTCTCC GCCACCAGCT CCGGTGCGAT CCTCATCCCG CTCTCGGTGG CGATGATCGT CACCTCGATC GTGGTGGGCC TGCTCATCAG CCGCTTCGGC AACTACAAGG TGTTCCTGCT GCTGGGCGGC GCAGTGCTCG TGGCGGGCTA CCTGCTGCTG TCCCGGATCC AGTACGGCGA CTCGCCCTGG CACCTCACCC TCGCGATGGT GGTGATCGGG CTCGGGCTCG GCCTGTGCAT GCAGGTGTAC ACCCTCGTGG TGCAGAACGT GGTGTCGCAG CGCGAGCTGG GGGTCGCCAC CGCGGCCATC CAGTTCTTCC GCAACATCGG CTCGACCATC GGCACCGCGG TGCTCGGCAC CGTGATGTCC GCCCAGATGG GCTCGGCGAT CGCACGTCAG ATCGAAGCGC TGCCGAAGGA GCAGCTCGCC GCCCTGCAGG AGAGCGGGAA CGGGGCGGAC ACCTCGGGGC TCGAATCCGC GGTGCTCGAC CCGGCCGTGC TCGAACAGCT GCCCGAGTTC CTCGTCGACC CGATCCGCGC CGGCATGGGC GAGGCGATGC ACATCGTGTT CCTCACCGCC GTGCCCTTCG TGGTGCTCGC GCTGCTGCTC TCGGTGTTCA TCAAGCAGGT CCCGCTGCGG GACACGCTCG AGACCGCTGA GGAGCCCTCC GTCCAGCCCG GCACGGACGC CGCCGCGGAG ATCGCGGGCA CCGGCACCGA GCCGCAGGAG ATCCACCCGC GCACCGGGCC GATCCCTGTG GTCGAGAGCG ACGGCGAGGA CAGCGCGGCG GAGGGCCCGC GCTCCCCGGC CCCGACCGGC GGGCGCTGA
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Protein sequence | MSSAPPHASP PATASAAPAG SPAAFTGLDR QGKLVFVGLM LGMFVASLSQ TIVGPALPRI VAELGGVEYY SWVATAAMLV SAVAVPIVGK LSDLYGRRWF YLAGLAIFML GSILAGMATN FWFLVGARAV QGLGMGTLMP LSQTIIGDII PPRQRGKYQG IMGAVFGVTS VVGPLLGGTV TDNLGWRWLF YLTLPIGVVA FAFILRYLHL PRAAQRGKVD LLGIATLTPG LVIGLLATTW GGNDFAWGSP VIIGMYAVAA VLLIAFVIIE TRVEEPLLPM HLITRPIIAL SVGASFAIAV AMFGAIIYIP VYAQGVMGVS ATSSGAILIP LSVAMIVTSI VVGLLISRFG NYKVFLLLGG AVLVAGYLLL SRIQYGDSPW HLTLAMVVIG LGLGLCMQVY TLVVQNVVSQ RELGVATAAI QFFRNIGSTI GTAVLGTVMS AQMGSAIARQ IEALPKEQLA ALQESGNGAD TSGLESAVLD PAVLEQLPEF LVDPIRAGMG EAMHIVFLTA VPFVVLALLL SVFIKQVPLR DTLETAEEPS VQPGTDAAAE IAGTGTEPQE IHPRTGPIPV VESDGEDSAA EGPRSPAPTG GR
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