Gene Bfae_06510 details

Gene Information

• Locus tag: Bfae_06510
• ID: 8399199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: -
• Start bp: 749851
• End bp: 751779
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644996734
• Product: choline/carnitine/betaine transport
• Protein accession: YP_003154106
• Protein GI: 257067851
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1292] Choline-glycine betaine transporter
• TIGRFAM ID: [TIGR00842] choline/carnitine/betaine transport

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAGAG GCATTGTGTC CGCTCCGACG GCCAAATCCC CCTCCTCCCC GACAGCTGAT 
CCCCCCGCAG AGGGGAACTA TTCCCTCTCG AAGCCGGTCT TCTTCTTCGC CGGCGGCATC 
ATCCTCATCG CGGTCCTGTT CGCGCTGATC CTCCCGGACG TGTTCAACGA CGTCATCTCG 
ACGCTGAACT CCACGGTGGT CGACTCCATC GGCTGGTACT ACGTCCTGAT CGTCACCGCG 
TTCGTCGTGT TCGGCATCGT GGTGGCCGTC AGCCGCATGG GCAGCATCAA GCTCGGCAAG 
GATGACGACG TCCCCGAATA CAGCGTCTTC TCCTGGTTCG CGATGCTCTT CGCGGCCGGC 
ATGGGCATCG GCCTGGTGTT CTGGGGTGCG GCCGAGCCGC TGACCTTCTT CGCGGACACC 
GCCGCCCCCG GCATCCCGCC GAACGCGGCC GACATGGACG ACCCGACGCG CGCCGAGCGC 
GCGCTGGGGC AGACCTTCCT CCACTGGGGC CTGCACGCCT GGGGCATCTA CGTGGTGGTG 
GGCCTCGCCG TCGCCTACGC TGTGCACCGC AAGGGCCGCC CGGTCTCGAT CCGCTGGGCC 
CTCGAGCCGG TCCTCGGCAA GCGCACGGAC ACCTGGATCG GTGACCTCAT CGACATCATC 
GCGCTGGTGG GCACGCTCTT CGGCATCGCC ACCTCGCTCG GCTTCGGCGT GAACCAGATC 
GCCGCCGGCC TGGATCATCT CGGCGTGCTG CCGAACTCCA CGATCGTCCA GGTCATCATC 
GTCATCGTGG TGACGGCGCT GGCGACCCTC TCGGCCGCGA GCGGCGTCGA CAAGGGCATC 
AAGTTCCTCT CGAACCTCAA CATGGGCCTG GCGGCGCTGC TGCTGGTCAC CGTCCTGATC 
CTGGGCCCGA CGCTCTTCCT GCTGCGCGAC GTGGTCTCCA ACATCGGCTT CTACCTGCAG 
AATTTCCTGC AGCTCGCGTT CCAGACCCTG CCGTTCCGCG GCGAGGACGG CGGCAAGTGG 
CTGGGCAGCT GGACCACGTT CTACTGGGGA TGGTGGATCT CCTGGTCGCC CTTCGTGGGC 
GTGTTCATCG CCCGCATCTC CAAGGGCCGC ACGGTCCGCG AGTTCATCAC CGGCGTACTG 
CTGGTGCCGA CCTCGCTGAC CTTCCTGTGG TTCACCATCA TGGGCGGCAC CGCGCTGTAC 
GAGTCGGTGC TCAACGGGGT CGACTTCACC GACGCCGCGG GCGCGATCGA TCCGAACACG 
GCGCTGTTCG ACACCTTCGC CCAGCTGCCT GCGGGCGCGC TGCTCTCCGG CATCGCGGTC 
GTGCTGGTCT CGATCTTCTT CATCACCAGC GCCGACTCCG GCGCCTTCGT GATGGACATG 
ATCGCGCACA AGGGCGATCC GAACCCGCCG AAGATCACCC GCATCTTCTG GGCCTCGACC 
TCCGGCCTGA TCGCCGCGTC GCTGATCTGG GTGAGCTCGC TGTCCGGTGA CGCCGAGGCG 
AGCGGCATGA CCGCTCTGCA GTCCCTCGCG CTGCTCTCCG CGCTGCCGTT CTCCATCGTG 
ATGATCGGCA TGTGTCTCTC GCTGTGGCGC TCGCTGAGCC ACGAGGTCAA GGTCATCGAG 
AGGCTCGAGC TGCGCCTGCG CCAGCGCGAG TTCATGGAGC GCTACTCCGA GGAGATCGCC 
GACCAGGTCG ACGCACAGGT CGAGAAGGCG GTCGCGAGCG AGCTCGAGGG AGGCTTCGGC 
CAGCAGTTCC AGCAGCAGCT GGACCAGAAG GTCCACGAGC ACGTCATCGA GCACCTCTCG 
ACGTACACCG GCGAGGTGCC GCTCCCGCCG ACGGACGGCG GCCCCGGCGA CGGCACCGCC 
GCCGGCCCGA ACGGCGGATC CGGTCGCGGC AAGCGCCGGA TGCGCAACCC GTTCACCAAG 
GAGCAGTGA 

 

Protein sequence

MERGIVSAPT AKSPSSPTAD PPAEGNYSLS KPVFFFAGGI ILIAVLFALI LPDVFNDVIS 
TLNSTVVDSI GWYYVLIVTA FVVFGIVVAV SRMGSIKLGK DDDVPEYSVF SWFAMLFAAG 
MGIGLVFWGA AEPLTFFADT AAPGIPPNAA DMDDPTRAER ALGQTFLHWG LHAWGIYVVV 
GLAVAYAVHR KGRPVSIRWA LEPVLGKRTD TWIGDLIDII ALVGTLFGIA TSLGFGVNQI 
AAGLDHLGVL PNSTIVQVII VIVVTALATL SAASGVDKGI KFLSNLNMGL AALLLVTVLI 
LGPTLFLLRD VVSNIGFYLQ NFLQLAFQTL PFRGEDGGKW LGSWTTFYWG WWISWSPFVG 
VFIARISKGR TVREFITGVL LVPTSLTFLW FTIMGGTALY ESVLNGVDFT DAAGAIDPNT 
ALFDTFAQLP AGALLSGIAV VLVSIFFITS ADSGAFVMDM IAHKGDPNPP KITRIFWAST 
SGLIAASLIW VSSLSGDAEA SGMTALQSLA LLSALPFSIV MIGMCLSLWR SLSHEVKVIE 
RLELRLRQRE FMERYSEEIA DQVDAQVEKA VASELEGGFG QQFQQQLDQK VHEHVIEHLS 
TYTGEVPLPP TDGGPGDGTA AGPNGGSGRG KRRMRNPFTK EQ