Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_05820 |
Symbol | |
ID | 8399130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 676237 |
End bp | 677769 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644996666 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003154038 |
Protein GI | 257067783 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.835158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGC ACACGCCCAC CCCCACCGGA GAGCTCCCCG CCGTCGAGAC CCCGGGCCTC GTGGCCGGCG GCGCCTCCGC CGCCGACGCC GAGACCCACG CTCCCGACGC CCCGCAGGAC GTGAAGGTCG TCCCGATCAT CGCGGTGCTG GTGGTCTCCG CCTTCGTGAT GATCCTCAAC GAGACCCTGC TCTCCGTCGC GCTGCCGGTG CTGATGCAGG ACCTCTCCAT CACCGCGGTC ACCGCGCAGT GGCTGTCCAC CGGCTTCATG CTCACGATGG CCGTGGTCAT CCCCACCACC GGCTTCCTCA TGAAGCGGCT GTCGATCCGC ACCGTGTTCA CCGTCGCGAT GCTGCTGTTC CTCGCCGGCA CCGCCGTCGC CATGCTCGCC CCCACCTTCC CGGTGCTGCT CGGCGCCCGG GTGGTGCAGG CCGCCGGCAC CGCGATGGTG CTGCCGCTGC TGATGACCAC GATCCTCGCG CTGGTGCCGA TCCGCGCCCG CGGCCTCGTG ATGGGTCTGG TGGGCGTGGT CATCTCCGCC GCCCCGGCGC TGGGCCCGTC GATCTCCGGG TTCATCCTCG AGCAGTGGAC CTGGCACTAC CTGTTCGTGA TGATGCTGCC GATCGTCGTG GTCGCCCTGA CCATCGGCCT GCTGTTCATG CGCAACTACA CCGAGCCCGA GGCCGTGCGC CTGGACGTCC TGTCGGTGAT CCTCTCCGCG ATCGGCTTCG GCGGCGCGAT CTACGCGCTG GCCTCGATCA GCGGCATCGT CGACGGCAGC AACCGAGTGC TGCCGCTGAT CGTCGTCGCC GTCGGCGCGC TGGCGCTGGT GCTGTTCTGC ACCCGCCAGG TGCGCATGCT CTCCCGCGGC CAGGAGCCGC TGCTGGACCT GCGCCCCCTC AAGGTGCGCA CCTTCTCCGT CTCCGTGCTG GTGATCCTGC TGGGCTTCGC CACCATGCTG GGCACCGTCG TGGCGCTGCC GCTGTACATG ACCGGTGCGC TCGGCATGTC CACCTTCGAC GTGGGCCTGA CCATGCTGCC CGGCGCGGCC GCCTCCGGCC TGCTCGGACC GCTGGTCGGC GCGCTCTACG ATCGGGTGGG CCCGCGCCCC ATCGTGGTGC CCGGCGCGGC GCTGATGGCG CTGGTGTGCT GGCTCGAGGT GGTCCTGCTC GACGCGGAGG CCACCCAGGG CCACGTCGTG GCGCTGAACA TCCCGCTGGG CATCGGCATG GCCATGGTGA TGACGCCGCT GATGGCGCTG TCCCTCGGCG CGCTGCCGCG CGAGCTGTAC GGCCACGGCT CCGCGATCCT CAACACCCTG CAGCAGCTCG CCGGTGCGCT CGGCACCGCC GTGTTCATCG CCCTGCTCAC CCTCGGTGCG GTGGTCGCCT CCGAGTCCGG CGCCTCCGAA CAGCTCGCGC AGGCCTCGGG CGCCTCCTGG GCCTTCGCGT TCGGCGGCAT CATGACCACC GCGGCCATCG TGCTCGCCTG CACCCTGAAG CGGAACCCCG CCGAGGTCGA GCAGAGCGCC TGA
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Protein sequence | MSTHTPTPTG ELPAVETPGL VAGGASAADA ETHAPDAPQD VKVVPIIAVL VVSAFVMILN ETLLSVALPV LMQDLSITAV TAQWLSTGFM LTMAVVIPTT GFLMKRLSIR TVFTVAMLLF LAGTAVAMLA PTFPVLLGAR VVQAAGTAMV LPLLMTTILA LVPIRARGLV MGLVGVVISA APALGPSISG FILEQWTWHY LFVMMLPIVV VALTIGLLFM RNYTEPEAVR LDVLSVILSA IGFGGAIYAL ASISGIVDGS NRVLPLIVVA VGALALVLFC TRQVRMLSRG QEPLLDLRPL KVRTFSVSVL VILLGFATML GTVVALPLYM TGALGMSTFD VGLTMLPGAA ASGLLGPLVG ALYDRVGPRP IVVPGAALMA LVCWLEVVLL DAEATQGHVV ALNIPLGIGM AMVMTPLMAL SLGALPRELY GHGSAILNTL QQLAGALGTA VFIALLTLGA VVASESGASE QLAQASGASW AFAFGGIMTT AAIVLACTLK RNPAEVEQSA
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