| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_05550 |
|---|
| Symbol | |
|---|
| ID | 8399103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 643856 |
|---|
| End bp | 645508 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644996639 |
|---|
| Product | ABC-type dipeptide transport system, periplasmic component |
|---|
| Protein accession | YP_003154011 |
|---|
| Protein GI | 257067756 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.163393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGC TCACCCGCCG CTCCGCCCTC GCTCTCGGCC TCGCCGTCCC CGCCGCCGCG
ACGATGGCCG CCTGCGGTGC TGCCAGCGGC GGCTCCGGTG ACGCCGGCGG CGAGCCGCAG
CAGGGCGGCA CCCTGACCTA CCTCGAGCCG CAGACCTGGG CGACCCTCTA CCCGCCGGCC
GGAGGCTTCT ACCCCAACGG CGGCGTGCTC AACAACATCA CCGACCGCCT GCTGCACCAG
AACCCCGAGA CCCTCGAGCT CGAGCCGTGG ATCGCCGCCG AGCTGCCCGA GGTCAACGAG
GACGCCACCG AGTACACGTT CACGCTGCGC GAGGACGCCA CCTACTCCGA CGGCACCCCG
ATCGACGCCG AGAACGTGGT GAAGAACTTC GACCTCTTCG GCAAGGGCGA TGCCGACCGT
GCGCTGACCG TCTCCGAGGC GATCAACAAC TACGACCACG GCGAGGTCGT CGATGCGACG
ACCGTGAAGT TCCACTTCTC GGCGCCCGCG CCGGGCTTCG CGCAGGCCGT CTCCACGATC
AACTCCGGGC TGCTCTCCAC CGCCACCCTG GATCGCACCA GCGAGGAGTT CGGGCCCGGC
AACGCGACCG AGATCATCGC CTCCGGCCCC TTCGTCATCG CGGAAGAGGA GATCGGCACC
CGGCTGAAGC TCACCGTGCG TGAGGACTAC GCCTGGGCGC CCGCCTCCCT CGAGCACGAG
GGCCGCGCAT ATCTCGACGC GATCGACATC ATCGTCGCCG CGGAGGACAG CGTGCGCGTG
GGCACCCTGA CCTCCCAGCA GGCGCACCTG GCCCGCCAGA TCGAGGCGCC CGACGAGCCG
CAGTTCGACG CCGACGGCCT CGCCCTGCAC GCCGCGGCCA CCAACGGCGT CACCAACAGC
CTCAGCTTCC GCTTCCGCGA CCCGGCCCTC GAGGACCTGG CCACCCGGCA GGCGCTGATC
GCCGCGATCG ACCGCCAGGC CATCGTGGAC ACCCTGTTCA CCGACAGCTA CCCGCTGGCC
ACCGGCATCC TGGGCACCAC GGCGCTGGGC TACACGGACA CCTCCGAGAA CTACGCGCAC
GACCTCGAGC GGGCGGCCTC GCTGCTGGAC GAGGCCGGCT GGGAGGCGGG GGCCGACGGC
ACCCGCACCA AGGACGGCGA GGCCCTGACC CTCACCTTCA ACGAGGCGCT GCCCCAGCCC
CGCTCCCGCG AGGTGGTCAC CCTGATCCAG GAGCAGCTGT CCGAGCTCGG CATCGCCGTG
GAGCTGCTGC CCGGCGACCA GGCCACGCAG GACGCCGCCC GCGCCGAGCC CGGCACCGTG
CAGGTGTACC ACTCGATGGT GGGCCGCGCG GACTACGACG TGCTGAAGTC GCAGCTGTCC
TCCGAGAACC GCAACGCGCT GCTGAACGGC CACCCCGACG GCAGCGTCGG CGACGAGGAG
CTCGACGAGC TGCTCGCCGC GATCGCCTCC ACCCCCGGGG ACGAGGAGCG CGCCGAGGCC
TCCGCCGCCG CGCAGGCCCA CATCGCCGAG AACGCGTACG TGCTGCCGCT GTTCGAGGAG
CCGCAGGTGT TCGGCTACGT CGAGACGGTG CAGGGCTTCG CCACCGAGTC GGTGGGCCGC
CCCAGCTTCT ACGACACCTG GCTGACGAGC TGA
|
|---|
| Protein sequence | MSALTRRSAL ALGLAVPAAA TMAACGAASG GSGDAGGEPQ QGGTLTYLEP QTWATLYPPA
GGFYPNGGVL NNITDRLLHQ NPETLELEPW IAAELPEVNE DATEYTFTLR EDATYSDGTP
IDAENVVKNF DLFGKGDADR ALTVSEAINN YDHGEVVDAT TVKFHFSAPA PGFAQAVSTI
NSGLLSTATL DRTSEEFGPG NATEIIASGP FVIAEEEIGT RLKLTVREDY AWAPASLEHE
GRAYLDAIDI IVAAEDSVRV GTLTSQQAHL ARQIEAPDEP QFDADGLALH AAATNGVTNS
LSFRFRDPAL EDLATRQALI AAIDRQAIVD TLFTDSYPLA TGILGTTALG YTDTSENYAH
DLERAASLLD EAGWEAGADG TRTKDGEALT LTFNEALPQP RSREVVTLIQ EQLSELGIAV
ELLPGDQATQ DAARAEPGTV QVYHSMVGRA DYDVLKSQLS SENRNALLNG HPDGSVGDEE
LDELLAAIAS TPGDEERAEA SAAAQAHIAE NAYVLPLFEE PQVFGYVETV QGFATESVGR
PSFYDTWLTS
|
|---|
| |