Gene Bfae_03620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_03620 
SymbolrumB 
ID8398910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp417634 
End bp418800 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content77% 
IMG OID644996452 
Product23S rRNA methyluridine methyltransferase 
Protein accessionYP_003153827 
Protein GI257067572 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGTGCC ACCACTTCGA CTCCGGCGCG TGCAGGTCCT GCACGCTGCT GGACCTCCCC 
CGCCCGCAGC AGCTCGCCGA GGGCCGGGAA CGGGTCGAAT CGCTGCTGGC TCCGTTCTTC
GCACCCGGCA CCCGGTGGGG GCCGCCGCTG CTCGGCCCCG AGGCCGGGTT CCGCGCCCGC
GGCAAGATGG CCGTCGGAGG CACCGCCGCC GCCCCGGTGC TGACGCTGCC CGGTCAGGCC
GCCGGCACCG ACCTGTGCGA CTGCCCCCTG TACCCCGCCG GGGTCGAGGA GGTGCTCGAG
GGGGCGAAGG CCCTGATCCG CCGCGCCCAG GTCCCGCCCT ACGACGTCGC CCGACGCCGC
GGGGAGATCA AGAACGTGCT GGTCACCGCG TCACCGGACG GGCAGCATCT GCTGCGCCTG
GTGCTGCGCA GCGAGCGGGC GCTGGGCCGC CTCCGCGAGC ACCTGCCGCG GCTGCTCGCG
GCGCACCCCT CGCTCATCGC GGTGAGCGCG AACATCCACC CCGCGCACAC CACCGCCGTC
GAGGGCGCGC AGGAGATCCA CCTCGCGGGC GCCGCCACGA TCCCGGTGCG CACCGGGGAC
GTCACCCTGT TCGCCCGCCC GCAGTCCTTC CTCCAGACCA ACACCGCCGT CGCCGCCCAG
CTGTACCGGC AGGGGGCGGC CTGGGCCCGT GAGATCCTCG CGCAGCCCGG CGCCGAGGGG
GCACCGCGCG TATGGGACCT CTACTGCGGC CTCGGCGGCT TCGCGCTCCA CGTCGCGCGC
GCCGTGCCCG GCGCCCGCGT CACCGGCGTC GAAGTCTCCC CCCAGGCCAT CGACGGGGCC
CGCGAGGCGG CGGAGGCGGC CGGGCTCCGC TCCGCGACCT TCCTCGCCGC CGACGCCACC
CGCTGGGCGG CCACGGAGGC CGCGGGGCCG AAGGGACCGC CGGATCTCGC CGTGGTGAAC
CCGCCCCGCC GCGGGCTGGG CCCCGAGCTC GCCGGCTGGC TCGAGCGCTC CGGCGTGGCC
GACGTGCTGT ACTCGAGCTG CAACCCGGCG ACCCTGGCCA CGGACCTCGC GGCCATGCCC
TCGCTGCAGA TCACCGCCGG ACGCTACGTC GACATGTTCC CGCACACCGC GCACGCCGAG
GTCATCGTGC GCCTGCGCCG CACCTGA
 
Protein sequence
MRCHHFDSGA CRSCTLLDLP RPQQLAEGRE RVESLLAPFF APGTRWGPPL LGPEAGFRAR 
GKMAVGGTAA APVLTLPGQA AGTDLCDCPL YPAGVEEVLE GAKALIRRAQ VPPYDVARRR
GEIKNVLVTA SPDGQHLLRL VLRSERALGR LREHLPRLLA AHPSLIAVSA NIHPAHTTAV
EGAQEIHLAG AATIPVRTGD VTLFARPQSF LQTNTAVAAQ LYRQGAAWAR EILAQPGAEG
APRVWDLYCG LGGFALHVAR AVPGARVTGV EVSPQAIDGA REAAEAAGLR SATFLAADAT
RWAATEAAGP KGPPDLAVVN PPRRGLGPEL AGWLERSGVA DVLYSSCNPA TLATDLAAMP
SLQITAGRYV DMFPHTAHAE VIVRLRRT